CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1004 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31004T1004delT1822deldelACT---222215729-5731

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31004T1004delACT---2222All0.000004
ORF1ab/nsp31004T1004delACT---66B.1.1.70.000005
ORF1ab/nsp31004T1004delACT---22B.1.360.000292
ORF1ab/nsp31004T1004delACT---22B.1.617.20.000008
ORF1ab/nsp31004T1004delACT---11A.2.20.001689
ORF1ab/nsp31004T1004delACT---11AY.620.000436
ORF1ab/nsp31004T1004delACT---11AY.750.000056
ORF1ab/nsp31004T1004delACT---11AY.850.000427
ORF1ab/nsp31004T1004delACT---11B.1.1.1390.022727
ORF1ab/nsp31004T1004delACT---11B.1.1.1420.017544
ORF1ab/nsp31004T1004delACT---11B.1.1.1590.004673
ORF1ab/nsp31004T1004delACT---11B.1.3190.003049
ORF1ab/nsp31004T1004delACT---11B.1.5460.003704
ORF1ab/nsp31004T1004delACT---11B.150.017544
ORF1ab/nsp31004T1004delACT---11B.340.013699
ORF1ab/nsp31004T1004delACT---11C.370.000116