CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 10 | D10D | D828D | syn | gaC | gaT | 113244 | 113244 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10Y | D828Y | nonsyn | Gac | Tac | 1114 | 1114 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10N | D828N | nonsyn | Gac | Aac | 574 | 572 | 0.996516 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10N | D828N | nonsyn | GaC | AaT | 574 | 2 | 0.00348432 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10G | D828G | nonsyn | gAc | gGc | 155 | 153 | 0.987097 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10G | D828G | nonsyn | gAC | gGA | 155 | 1 | 0.00645161 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10G | D828G | nonsyn | gAC | gGT | 155 | 1 | 0.00645161 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10del | D828del | del | GAC | --- | 60 | 60 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10A | D828A | nonsyn | gAc | gCc | 40 | 40 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10E | D828E | nonsyn | gaC | gaA | 25 | 21 | 0.84 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10E | D828E | nonsyn | gaC | gaG | 25 | 4 | 0.16 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10V | D828V | nonsyn | gAc | gTc | 17 | 15 | 0.882353 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10V | D828V | nonsyn | gAC | gTT | 17 | 1 | 0.0588235 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10V | D828V | nonsyn | gAC | gTA | 17 | 1 | 0.0588235 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10H | D828H | nonsyn | Gac | Cac | 7 | 7 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10del1 | D828del1 | del | Gac | -ac | 6 | 4 | 0.666667 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10del1 | D828del1 | del | GaC | Ca- | 6 | 2 | 0.333333 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10I | D828I | nonsyn | GAC | ATA | 4 | 2 | 0.5 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10I | D828I | nonsyn | GAc | ATc | 4 | 1 | 0.25 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10I | D828I | nonsyn | GAC | ATT | 4 | 1 | 0.25 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10K | D828K | nonsyn | GaC | AaA | 2 | 2 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10R | D828R | nonsyn | GAC | AGA | 1 | 1 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10L | D828L | nonsyn | GAC | TTA | 1 | 1 | 1 | 2747-2749 |
ORF1ab/nsp3 | 10 | D10S | D828S | nonsyn | GAc | AGc | 1 | 1 | 1 | 2747-2749 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 113244 | 113244 | All | 0.021659 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 60506 | 60506 | P.1 | 0.953211 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 20850 | 20850 | P.1.14 | 0.996654 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5472 | 5472 | P.1.17 | 0.88515 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4145 | 4145 | P.1.15 | 0.963058 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3416 | 3416 | P.1.10 | 0.920507 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3090 | 3090 | P.1.7 | 0.98659 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2917 | 2917 | P.1.1 | 0.92662 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2576 | 2576 | P.1.16 | 0.963711 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1804 | 1804 | B.1.617.2 | 0.006793 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1741 | 1741 | P.1.12 | 0.842691 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1141 | 1141 | P.1.17.1 | 0.99825 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1114 | 1114 | All | 0.000213 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1021 | 1021 | P.1.13 | 0.917341 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1020 | 1020 | P.1.4 | 0.996094 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 859 | 859 | P.1.2 | 0.993064 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 572 | 574 | All | 0.000109 |
ORF1ab/nsp3 | 10 | D10N | GaC | AaT | 2 | 574 | All | 0 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 542 | 542 | B.1.429 | 0.012753 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 514 | 514 | P.1.6 | 1 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 457 | 457 | AY.47 | 0.014215 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 336 | 336 | AY.43 | 0.001489 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 296 | 296 | B.1.221 | 0.021026 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 209 | 209 | P.1.8 | 1 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 206 | 206 | P.1.9 | 0.990385 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 187 | 187 | B.1.351.2 | 0.056581 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 153 | 155 | All | 0.000029 |
ORF1ab/nsp3 | 10 | D10G | gAC | gGA | 1 | 155 | All | 0 |
ORF1ab/nsp3 | 10 | D10G | gAC | gGT | 1 | 155 | All | 0 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 137 | 137 | B.1.1.7 | 0.000123 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 101 | 101 | P.1.10.1 | 0.821138 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 98 | 98 | P.1.11 | 1 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 84 | 84 | B.1.429 | 0.001976 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 74 | 74 | B.1 | 0.000678 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 60 | 60 | All | 0.000011 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 60 | 60 | B.1.609 | 0.028763 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 59 | 59 | AY.4.2.1 | 0.00879 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 59 | 59 | B.1.1 | 0.00107 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 51 | 51 | B.1.1.7 | 0.000046 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 42 | 42 | B.1.2 | 0.00037 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 40 | 40 | All | 0.000008 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 40 | 40 | AY.44 | 0.000243 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 36 | 36 | AY.7 | 0.007056 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 32 | 32 | AY.102 | 0.000848 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 32 | 32 | AY.4 | 0.00005 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 31 | 31 | AY.14 | 0.002728 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 29 | 29 | P.1.3 | 1 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 26 | 26 | B.1.427 | 0.001313 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 26 | 26 | R.1 | 0.00234 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 21 | 25 | All | 0.000004 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaG | 4 | 25 | All | 0.000001 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 25 | 25 | AY.42 | 0.001006 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 24 | 24 | AY.4 | 0.000037 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 23 | 23 | P.1.10.2 | 0.958333 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 19 | 19 | C.37 | 0.002205 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 15 | 17 | All | 0.000003 |
ORF1ab/nsp3 | 10 | D10V | gAC | gTA | 1 | 17 | All | 0 |
ORF1ab/nsp3 | 10 | D10V | gAC | gTT | 1 | 17 | All | 0 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 17 | 17 | B.1.1.28 | 0.005291 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 16 | 16 | AY.103 | 0.000099 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 16 | 16 | B.1.1.289 | 0.033333 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 16 | 16 | B.1.416 | 0.020305 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 16 | 16 | B.1.617.2 | 0.00006 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 15 | 15 | AY.39 | 0.000371 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 13 | 13 | AY.103 | 0.000081 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 13 | 13 | AY.4.2 | 0.000282 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 13 | 13 | AY.98.1 | 0.00063 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 13 | 13 | B.1.258.17 | 0.001352 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 13 | 13 | P.1.5 | 1 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 12 | 12 | B.1.1.528 | 0.057692 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 11 | 11 | AY.4 | 0.000017 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 11 | 11 | B.1 | 0.000101 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 10 | 10 | B.1.1.7 | 0.000009 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 10 | 10 | B.1.2 | 0.000088 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 10 | 10 | B.1.526 | 0.000235 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 9 | 9 | AY.4 | 0.000014 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 9 | 9 | B.1 | 0.000082 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 9 | 9 | B.1.1.161 | 0.031802 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 9 | 9 | B.1.600 | 0.052632 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 9 | 9 | B.1.617.2 | 0.000034 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 8 | 8 | AY.16.1 | 0.003759 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 7 | 7 | All | 0.000001 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 7 | 7 | AY.29 | 0.00011 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 7 | 7 | B.1.1 | 0.000127 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 7 | 7 | B.1.1.1 | 0.002287 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 7 | 7 | B.1.621 | 0.00062 |
ORF1ab/nsp3 | 10 | D10del1 | Gac | -ac | 4 | 6 | All | 0.000001 |
ORF1ab/nsp3 | 10 | D10del1 | GaC | Ca- | 2 | 6 | All | 0 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 6 | 6 | AY.3 | 0.00006 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 6 | 6 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 6 | 6 | AY.40 | 0.005786 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 6 | 6 | B.1.177.21 | 0.000459 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 6 | 6 | B.1.596 | 0.000523 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 5 | 5 | AY.25 | 0.00003 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | AY.42 | 0.000201 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 5 | 5 | AY.44 | 0.00003 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 5 | 5 | AY.44 | 0.00003 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | AY.99.2 | 0.000461 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 3 | 5 | B.1 | 0.000027 |
ORF1ab/nsp3 | 10 | D10G | gAC | gGT | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10G | gAC | gGA | 1 | 5 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 5 | 5 | B.1.1.232 | 0.009074 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 4 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 10 | D10N | GaC | AaT | 1 | 5 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | B.1.349 | 0.003574 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 5 | 5 | B.1.582 | 0.002453 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 4 | 4 | 0.222222 | |
ORF1ab/nsp3 | 10 | D10I | GAC | ATA | 2 | 4 | All | 0 |
ORF1ab/nsp3 | 10 | D10I | GAC | ATT | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 10 | D10I | GAc | ATc | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | AY.23 | 0.000279 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 4 | 4 | AY.38 | 0.001997 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 4 | 4 | AY.43 | 0.000018 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 4 | 4 | AY.93 | 0.001092 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 4 | 4 | B.1 | 0.000037 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | B.1.177.75 | 0.004162 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 4 | 4 | B.1.241 | 0.003247 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | B.1.258 | 0.000266 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 4 | 4 | C.4 | 0.04 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 4 | 4 | R.1 | 0.00036 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 3 | 3 | AY.102 | 0.00008 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 3 | 3 | AY.20 | 0.000117 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 3 | 3 | AY.3 | 0.00003 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | AY.4.2 | 0.000065 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | AY.65 | 0.001599 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | AY.9.1 | 0.000251 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 3 | 3 | B.1.1 | 0.000054 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | B.1.1.263 | 0.004673 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | B.1.1.507 | 0.026087 |
ORF1ab/nsp3 | 10 | D10V | gAC | gTA | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10V | gAC | gTT | 1 | 3 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | B.1.636 | 0.020134 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | C.37.1 | 0.007853 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp3 | 10 | D10del1 | GaC | Ca- | 2 | 2 | 0.111111 | |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp3 | 10 | D10K | GaC | AaA | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | AY.120.2 | 0.002571 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | AY.39.1 | 0.000079 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp3 | 10 | D10del1 | Gac | -ac | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.59 | 0.001059 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | AY.75 | 0.000112 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | B.1.1.220 | 0.003717 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 2 | 2 | B.1.1.315 | 0.016949 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 2 | 2 | B.1.1.348 | 0.001592 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 2 | 2 | B.1.1.7 | 0.000002 |
ORF1ab/nsp3 | 10 | D10I | GAC | ATA | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10I | GAC | ATT | 1 | 2 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | B.1.177 | 0.000026 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 2 | 2 | B.1.2 | 0.000018 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaG | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 2 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 2 | 2 | B.1.36.21 | 0.00432 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | B.1.404 | 0.002604 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 2 | 2 | B.1.424 | 0.016129 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | B.1.533 | 0.019231 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 2 | 2 | B.1.575 | 0.000607 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 2 | 2 | N.6 | 0.014184 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaG | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 10 | D10R | GAC | AGA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 10 | D10L | GAC | TTA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 10 | D10S | GAc | AGc | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.100 | 0.000046 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.101 | 0.00049 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.119 | 0.000035 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.23.1 | 0.000417 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaG | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 10 | D10I | GAc | ATc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.5.3 | 0.000337 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 10 | D10del1 | Gac | -ac | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.93 | 0.000273 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 10 | D10S | GAc | AGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10K | GaC | AaA | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10R | GAC | AGA | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.1.174 | 0.003378 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.303 | 0.002762 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.1.322 | 0.008772 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.326 | 0.001761 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.388 | 0.045455 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.1.46 | 0.004367 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp3 | 10 | D10K | GaC | AaA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 1 | B.1.1.89 | 0.006061 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.212 | 0.016667 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp3 | 10 | D10del1 | Gac | -ac | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | B.1.371 | 0.001122 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.385 | 0.010638 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.399 | 0.001934 |
ORF1ab/nsp3 | 10 | D10N | Gac | Aac | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 10 | D10H | Gac | Cac | 1 | 1 | B.1.453 | 0.003236 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.546 | 0.003704 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.612 | 0.002653 |
ORF1ab/nsp3 | 10 | D10L | GAC | TTA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 10 | D10I | GAC | ATA | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | B.57 | 0.015152 |
ORF1ab/nsp3 | 10 | D10V | gAc | gTc | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaG | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 10 | D10Y | Gac | Tac | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 10 | D10G | gAc | gGc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 10 | D10A | gAc | gCc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 10 | D10N | GaC | AaT | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 10 | D10del | GAC | --- | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp3 | 10 | D10E | gaC | gaA | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp3 | 10 | D10D | gaC | gaT | 1 | 1 | P.4 | 0.003802 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|