CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = Y316S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2316Y316SY496SnonsyntAttCt1570.4666671751-1753
ORF1ab/nsp2316Y316SY496SnonsynTATAGC1520.1333331751-1753
ORF1ab/nsp2316Y316SY496SnonsynTAtAGt1520.1333331751-1753
ORF1ab/nsp2316Y316SY496SnonsyntATtCA1520.1333331751-1753
ORF1ab/nsp2316Y316SY496SnonsyntATtCC1520.1333331751-1753

Details of the mutation Y316S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2316Y316StAttCt715All0.000001
ORF1ab/nsp2316Y316StATtCC215All0
ORF1ab/nsp2316Y316StATtCA215All0
ORF1ab/nsp2316Y316STAtAGt215All0
ORF1ab/nsp2316Y316STATAGC215All0
ORF1ab/nsp2316Y316StAttCt3110.166667
ORF1ab/nsp2316Y316StATtCC2110.111111
ORF1ab/nsp2316Y316StATtCA2110.111111
ORF1ab/nsp2316Y316STAtAGt2110.111111
ORF1ab/nsp2316Y316STATAGC2110.111111
ORF1ab/nsp2316Y316StAttCt11AY.1140.000231
ORF1ab/nsp2316Y316StAttCt11AY.40.000002
ORF1ab/nsp2316Y316StAttCt11B.1.1770.000013
ORF1ab/nsp2316Y316StAttCt11B.1.5770.000687