CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = V571L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2571V571LV751LnonsynGtgTtg500850020.9988022516-2518
ORF1ab/nsp2571V571LV751LnonsynGtgCtg500840.0007987222516-2518
ORF1ab/nsp2571V571LV751LnonsynGtGCtT500820.0003993612516-2518

Details of the mutation V571L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2571V571LGtgTtg50025008All0.000957
ORF1ab/nsp2571V571LGtgCtg45008All0.000001
ORF1ab/nsp2571V571LGtGCtT25008All0
ORF1ab/nsp2571V571LGtgTtg24392439B.1.5610.968241
ORF1ab/nsp2571V571LGtgTtg18561857AY.40.002889
ORF1ab/nsp2571V571LGtgCtg11857AY.40.000002
ORF1ab/nsp2571V571LGtgTtg148148B.1.617.20.000557
ORF1ab/nsp2571V571LGtgTtg145145B.1.1.70.00013
ORF1ab/nsp2571V571LGtgTtg9494B.10.000861
ORF1ab/nsp2571V571LGtgTtg4747B.1.177.860.008622
ORF1ab/nsp2571V571LGtgTtg3030AY.750.001681
ORF1ab/nsp2571V571LGtgTtg2222AY.1020.000583
ORF1ab/nsp2571V571LGtgTtg1616B.1.20.000141
ORF1ab/nsp2571V571LGtgTtg1313B.1.1.2220.002652
ORF1ab/nsp2571V571LGtgTtg1010AY.1200.000372
ORF1ab/nsp2571V571LGtgTtg99B.1.360.001313
ORF1ab/nsp2571V571LGtgTtg88AY.1030.00005
ORF1ab/nsp2571V571LGtgTtg88AY.430.000035
ORF1ab/nsp2571V571LGtgTtg78B.1.10.000127
ORF1ab/nsp2571V571LGtgCtg18B.1.10.000018
ORF1ab/nsp2571V571LGtgTtg88B.1.1600.00025
ORF1ab/nsp2571V571LGtgTtg77AY.420.000282
ORF1ab/nsp2571V571LGtgTtg66AY.1190.000212
ORF1ab/nsp2571V571LGtgTtg66AY.410.001764
ORF1ab/nsp2571V571LGtgTtg66B.1.1.4160.00543
ORF1ab/nsp2571V571LGtgTtg66B.1.5750.00182
ORF1ab/nsp2571V571LGtgTtg66P.10.000095
ORF1ab/nsp2571V571LGtgTtg55B.1.1770.000066
ORF1ab/nsp2571V571LGtgTtg55B.1.2810.108696
ORF1ab/nsp2571V571LGtgTtg55B.1.5820.002453
ORF1ab/nsp2571V571LGtgTtg55B.1.6180.020161
ORF1ab/nsp2571V571LGtgTtg44AY.390.000099
ORF1ab/nsp2571V571LGtgTtg44AY.460.000416
ORF1ab/nsp2571V571LGtgTtg44B.1.1.270.022599
ORF1ab/nsp2571V571LGtgTtg44B.1.36.100.019139
ORF1ab/nsp2571V571LGtgTtg23AY.250.000012
ORF1ab/nsp2571V571LGtgCtg13AY.250.000006
ORF1ab/nsp2571V571LGtgTtg33AY.330.0002
ORF1ab/nsp2571V571LGtgTtg33AY.910.002191
ORF1ab/nsp2571V571LGtgTtg33B.1.4970.000944
ORF1ab/nsp2571V571LGtGCtT220.111111
ORF1ab/nsp2571V571LGtgTtg22AY.140.000176
ORF1ab/nsp2571V571LGtgTtg22AY.4.20.000043
ORF1ab/nsp2571V571LGtgTtg22AY.440.000012
ORF1ab/nsp2571V571LGtgTtg22AY.540.000191
ORF1ab/nsp2571V571LGtgTtg22AY.60.000082
ORF1ab/nsp2571V571LGtgTtg22AY.650.001066
ORF1ab/nsp2571V571LGtgTtg22AY.740.000231
ORF1ab/nsp2571V571LGtgTtg22B.1.1390.001466
ORF1ab/nsp2571V571LGtgTtg22B.1.2320.001075
ORF1ab/nsp2571V571LGtgTtg22B.1.3110.000549
ORF1ab/nsp2571V571LGtgTtg22B.1.3510.000059
ORF1ab/nsp2571V571LGtgTtg22B.1.36.380.003284
ORF1ab/nsp2571V571LGtgTtg22B.1.4290.000047
ORF1ab/nsp2571V571LGtgTtg22B.1.438.10.000215
ORF1ab/nsp2571V571LGtgTtg22B.1.5550.044444
ORF1ab/nsp2571V571LGtgTtg22B.1.5710.019417
ORF1ab/nsp2571V571LGtgTtg11A.60.005128
ORF1ab/nsp2571V571LGtgTtg11AY.16.10.00047
ORF1ab/nsp2571V571LGtgTtg11AY.230.00007
ORF1ab/nsp2571V571LGtgTtg11AY.260.000028
ORF1ab/nsp2571V571LGtgTtg11AY.34.10.00051
ORF1ab/nsp2571V571LGtgTtg11AY.4.50.000107
ORF1ab/nsp2571V571LGtgTtg11AY.46.50.000198
ORF1ab/nsp2571V571LGtgTtg11AY.50.000021
ORF1ab/nsp2571V571LGtgTtg11AY.5.40.000277
ORF1ab/nsp2571V571LGtgTtg11AY.800.001129
ORF1ab/nsp2571V571LGtgTtg11B.1.1.2140.000055
ORF1ab/nsp2571V571LGtgTtg11B.1.1.3060.000438
ORF1ab/nsp2571V571LGtgCtg11B.1.1.4590.015385
ORF1ab/nsp2571V571LGtgTtg11B.1.177.200.001517
ORF1ab/nsp2571V571LGtgTtg11B.1.2430.00007
ORF1ab/nsp2571V571LGtgTtg11B.1.2470.014925
ORF1ab/nsp2571V571LGtgTtg11B.1.36.180.00042
ORF1ab/nsp2571V571LGtgTtg11B.1.36.390.002217
ORF1ab/nsp2571V571LGtgTtg11B.1.3690.000285
ORF1ab/nsp2571V571LGtgTtg11B.1.3960.000706
ORF1ab/nsp2571V571LGtgTtg11B.1.429.10.012048
ORF1ab/nsp2571V571LGtgTtg11B.1.4600.017857
ORF1ab/nsp2571V571LGtgTtg11B.1.466.20.000391
ORF1ab/nsp2571V571LGtgTtg11B.1.5260.000024
ORF1ab/nsp2571V571LGtgTtg11B.1.6100.003546
ORF1ab/nsp2571V571LGtgTtg11P.1.70.000319
ORF1ab/nsp2571V571LGtgTtg11Q.30.000145