CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = V440V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2440V440VV620VsyngtTgtC9939730.9798592123-2125
ORF1ab/nsp2440V440VV620VsyngtTgtA993170.01711982123-2125
ORF1ab/nsp2440V440VV620VsyngtTgtG99330.003021152123-2125

Details of the mutation V440V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2440V440VgtTgtC973993All0.000186
ORF1ab/nsp2440V440VgtTgtA17993All0.000003
ORF1ab/nsp2440V440VgtTgtG3993All0.000001
ORF1ab/nsp2440V440VgtTgtC599599AY.790.725182
ORF1ab/nsp2440V440VgtTgtC173173AY.1030.001074
ORF1ab/nsp2440V440VgtTgtC7070AY.290.001104
ORF1ab/nsp2440V440VgtTgtC3636B.1.177.620.042908
ORF1ab/nsp2440V440VgtTgtC2929B.1.10.000526
ORF1ab/nsp2440V440VgtTgtC1516B.1.617.20.000056
ORF1ab/nsp2440V440VgtTgtA116B.1.617.20.000004
ORF1ab/nsp2440V440VgtTgtA88AY.610.000838
ORF1ab/nsp2440V440VgtTgtC24AY.250.000012
ORF1ab/nsp2440V440VgtTgtA24AY.250.000012
ORF1ab/nsp2440V440VgtTgtC44AY.330.000267
ORF1ab/nsp2440V440VgtTgtC44B.10.000037
ORF1ab/nsp2440V440VgtTgtA34P.10.000047
ORF1ab/nsp2440V440VgtTgtC14P.10.000016
ORF1ab/nsp2440V440VgtTgtG13AY.40.000002
ORF1ab/nsp2440V440VgtTgtA13AY.40.000002
ORF1ab/nsp2440V440VgtTgtC13AY.40.000002
ORF1ab/nsp2440V440VgtTgtC33AY.9.20.00011
ORF1ab/nsp2440V440VgtTgtC33AY.920.000862
ORF1ab/nsp2440V440VgtTgtC23B.1.1.70.000002
ORF1ab/nsp2440V440VgtTgtG13B.1.1.70.000001
ORF1ab/nsp2440V440VgtTgtC33B.1.6270.006061
ORF1ab/nsp2440V440VgtTgtC22AY.1160.000574
ORF1ab/nsp2440V440VgtTgtC22AY.29.10.000441
ORF1ab/nsp2440V440VgtTgtC22AY.4.20.000043
ORF1ab/nsp2440V440VgtTgtC22AY.4.50.000215
ORF1ab/nsp2440V440VgtTgtC22AY.440.000012
ORF1ab/nsp2440V440VgtTgtC22B.1.5260.000047
ORF1ab/nsp2440V440VgtTgtC22D.20.00015
ORF1ab/nsp2440V440VgtTgtC11AY.370.000316
ORF1ab/nsp2440V440VgtTgtA11AY.420.00004
ORF1ab/nsp2440V440VgtTgtC11AY.430.000004
ORF1ab/nsp2440V440VgtTgtC11AY.450.000122
ORF1ab/nsp2440V440VgtTgtC11AY.50.000021
ORF1ab/nsp2440V440VgtTgtC11AY.5.30.000337
ORF1ab/nsp2440V440VgtTgtC11AY.590.00053
ORF1ab/nsp2440V440VgtTgtG11AY.7.10.000113
ORF1ab/nsp2440V440VgtTgtA11AY.710.000475
ORF1ab/nsp2440V440VgtTgtC11B.1.1.280.000311
ORF1ab/nsp2440V440VgtTgtC11B.1.1.3110.000358
ORF1ab/nsp2440V440VgtTgtC11B.1.1.3710.010417
ORF1ab/nsp2440V440VgtTgtC11B.1.1.5210.005348
ORF1ab/nsp2440V440VgtTgtC11B.1.20.000009
ORF1ab/nsp2440V440VgtTgtC11B.1.2430.00007
ORF1ab/nsp2440V440VgtTgtC11B.1.4270.00005
ORF1ab/nsp2440V440VgtTgtC11B.1.4290.000024