CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = V381A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2381V381AV561AnonsyngTtgCt12948129400.9993821946-1948
ORF1ab/nsp2381V381AV561AnonsyngTTgCA1294840.0003089281946-1948
ORF1ab/nsp2381V381AV561AnonsyngTTgCG1294830.0002316961946-1948
ORF1ab/nsp2381V381AV561AnonsyngTTgCC1294810.0000772321946-1948

Details of the mutation V381A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2381V381AgTtgCt1294012948All0.002475
ORF1ab/nsp2381V381AgTTgCA412948All0.000001
ORF1ab/nsp2381V381AgTTgCG312948All0.000001
ORF1ab/nsp2381V381AgTTgCC112948All0
ORF1ab/nsp2381V381AgTtgCt37393739B.1.360.545521
ORF1ab/nsp2381V381AgTtgCt23552355B.1.36.180.989496
ORF1ab/nsp2381V381AgTtgCt19671967B.1.36.170.971838
ORF1ab/nsp2381V381AgTtgCt16541654B.1.36.360.995786
ORF1ab/nsp2381V381AgTtgCt794794B.1.36.270.606107
ORF1ab/nsp2381V381AgTtgCt603603B.1.36.380.990148
ORF1ab/nsp2381V381AgTtgCt428428B.1.36.390.949002
ORF1ab/nsp2381V381AgTtgCt359359B.1.36.370.997222
ORF1ab/nsp2381V381AgTtgCt305310B.10.002794
ORF1ab/nsp2381V381AgTTgCA3310B.10.000027
ORF1ab/nsp2381V381AgTTgCC1310B.10.000009
ORF1ab/nsp2381V381AgTTgCG1310B.10.000009
ORF1ab/nsp2381V381AgTtgCt173173B.1.36.280.994253
ORF1ab/nsp2381V381AgTtgCt9090B.1.36.20.967742
ORF1ab/nsp2381V381AgTtgCt8686B.1.36.220.103865
ORF1ab/nsp2381V381AgTtgCt4747B.1.36.80.047
ORF1ab/nsp2381V381AgTtgCt4747B.1.4560.153595
ORF1ab/nsp2381V381AgTtgCt2525B.1.36.100.119617
ORF1ab/nsp2381V381AgTtgCt2323B.1.10.000417
ORF1ab/nsp2381V381AgTtgCt1616B.1.2600.053512
ORF1ab/nsp2381V381AgTtgCt1414B.1.4250.041916
ORF1ab/nsp2381V381AgTtgCt1414B.1.4620.101449
ORF1ab/nsp2381V381AgTtgCt1313B.1.36.160.018519
ORF1ab/nsp2381V381AgTtgCt1212B.1.1.390.006116
ORF1ab/nsp2381V381AgTtgCt1010B.1.617.20.000038
ORF1ab/nsp2381V381AgTtgCt99B0.00115
ORF1ab/nsp2381V381AgTtgCt89B.1.1.70.000007
ORF1ab/nsp2381V381AgTTgCG19B.1.1.70.000001
ORF1ab/nsp2381V381AgTtgCt79B.1.1770.000092
ORF1ab/nsp2381V381AgTTgCG19B.1.1770.000013
ORF1ab/nsp2381V381AgTTgCA19B.1.1770.000013
ORF1ab/nsp2381V381AgTtgCt77B.1.1.5260.024823
ORF1ab/nsp2381V381AgTtgCt77B.1.36.310.012259
ORF1ab/nsp2381V381AgTtgCt66AY.30.00006
ORF1ab/nsp2381V381AgTtgCt66B.1.36.240.037037
ORF1ab/nsp2381V381AgTtgCt66B.1.4680.034286
ORF1ab/nsp2381V381AgTtgCt55AY.40.000008
ORF1ab/nsp2381V381AgTtgCt55B.1.20.000044
ORF1ab/nsp2381V381AgTtgCt55B.1.3510.000149
ORF1ab/nsp2381V381AgTtgCt55B.1.36.350.013021
ORF1ab/nsp2381V381AgTtgCt44AY.420.000161
ORF1ab/nsp2381V381AgTtgCt44AY.80.002424
ORF1ab/nsp2381V381AgTtgCt44B.1.4590.016327
ORF1ab/nsp2381V381AgTtgCt33AY.440.000018
ORF1ab/nsp2381V381AgTtgCt33B.1.2430.000209
ORF1ab/nsp2381V381AgTtgCt33B.1.5330.028846
ORF1ab/nsp2381V381AgTtgCt22AY.430.000009
ORF1ab/nsp2381V381AgTtgCt22AY.750.000112
ORF1ab/nsp2381V381AgTtgCt22AY.9.20.000073
ORF1ab/nsp2381V381AgTtgCt22B.1.1.5190.000079
ORF1ab/nsp2381V381AgTtgCt22B.1.36.190.018519
ORF1ab/nsp2381V381AgTtgCt22B.1.36.70.008
ORF1ab/nsp2381V381AgTtgCt22B.1.4530.006472
ORF1ab/nsp2381V381AgTtgCt22B.1.4700.002809
ORF1ab/nsp2381V381AgTtgCt22B.1.4740.003802
ORF1ab/nsp2381V381AgTtgCt22B.1.4800.004975
ORF1ab/nsp2381V381AgTtgCt22P.1.100.000539
ORF1ab/nsp2381V381AgTtgCt11AU.20.002421
ORF1ab/nsp2381V381AgTtgCt11AY.390.000025
ORF1ab/nsp2381V381AgTtgCt11AY.4.20.000022
ORF1ab/nsp2381V381AgTtgCt11AY.650.000533
ORF1ab/nsp2381V381AgTtgCt11AY.820.001357
ORF1ab/nsp2381V381AgTtgCt11AY.90.000068
ORF1ab/nsp2381V381AgTtgCt11B.1.1.1890.001513
ORF1ab/nsp2381V381AgTtgCt11B.1.1.280.000311
ORF1ab/nsp2381V381AgTtgCt11B.1.1.2910.000742
ORF1ab/nsp2381V381AgTtgCt11B.1.1.3060.000438
ORF1ab/nsp2381V381AgTtgCt11B.1.1.3490.010309
ORF1ab/nsp2381V381AgTtgCt11B.1.1180.006711
ORF1ab/nsp2381V381AgTtgCt11B.1.1390.000733
ORF1ab/nsp2381V381AgTtgCt11B.1.1600.000031
ORF1ab/nsp2381V381AgTtgCt11B.1.1640.014925
ORF1ab/nsp2381V381AgTtgCt11B.1.177.40.000211
ORF1ab/nsp2381V381AgTtgCt11B.1.177.560.000668
ORF1ab/nsp2381V381AgTtgCt11B.1.177.70.000165
ORF1ab/nsp2381V381AgTtgCt11B.1.177.860.000183
ORF1ab/nsp2381V381AgTtgCt11B.1.2100.002132
ORF1ab/nsp2381V381AgTtgCt11B.1.2210.000071
ORF1ab/nsp2381V381AgTtgCt11B.1.2790.000514
ORF1ab/nsp2381V381AgTtgCt11B.1.3110.000275
ORF1ab/nsp2381V381AgTtgCt11B.1.3360.002439
ORF1ab/nsp2381V381AgTtgCt11B.1.36.10.00114
ORF1ab/nsp2381V381AgTtgCt11B.1.36.290.000517
ORF1ab/nsp2381V381AgTtgCt11B.1.36.330.007576
ORF1ab/nsp2381V381AgTtgCt11B.1.36.340.021277
ORF1ab/nsp2381V381AgTtgCt11B.1.36.90.003215
ORF1ab/nsp2381V381AgTtgCt11B.1.3710.001122
ORF1ab/nsp2381V381AgTtgCt11B.1.3960.000706
ORF1ab/nsp2381V381AgTtgCt11B.1.4220.000812
ORF1ab/nsp2381V381AgTtgCt11B.1.438.10.000107
ORF1ab/nsp2381V381AgTtgCt11B.1.4420.035714
ORF1ab/nsp2381V381AgTtgCt11B.1.4630.008065
ORF1ab/nsp2381V381AgTtgCt11B.1.4650.003802
ORF1ab/nsp2381V381AgTtgCt11B.1.4690.00361
ORF1ab/nsp2381V381AgTtgCt11B.1.5230.002451
ORF1ab/nsp2381V381AgTtgCt11B.1.5260.000024
ORF1ab/nsp2381V381AgTtgCt11B.1.5960.000087
ORF1ab/nsp2381V381AgTtgCt11B.1.6290.013333
ORF1ab/nsp2381V381AgTtgCt11B.1.6370.000073
ORF1ab/nsp2381V381AgTtgCt11B.4.10.018868
ORF1ab/nsp2381V381AgTtgCt11C.370.000116
ORF1ab/nsp2381V381AgTtgCt11D.20.000075
ORF1ab/nsp2381V381AgTtgCt11P.10.000016
ORF1ab/nsp2381V381AgTtgCt11P.1.140.000048