CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T85T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp285T85TT265TsynacCacT609556050.9196061058-1060
ORF1ab/nsp285T85TT265TsynacCacA60954580.07514361058-1060
ORF1ab/nsp285T85TT265TsynacCacG6095320.005250211058-1060

Details of the mutation T85T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp285T85TacCacT56056095All0.001072
ORF1ab/nsp285T85TacCacA4586095All0.000088
ORF1ab/nsp285T85TacCacG326095All0.000006
ORF1ab/nsp285T85TacCacT17511983B.1.1.70.001568
ORF1ab/nsp285T85TacCacA2201983B.1.1.70.000197
ORF1ab/nsp285T85TacCacG121983B.1.1.70.000011
ORF1ab/nsp285T85TacCacT454454B.1.1110.53349
ORF1ab/nsp285T85TacCacT434445B.1.617.20.001634
ORF1ab/nsp285T85TacCacA11445B.1.617.20.000041
ORF1ab/nsp285T85TacCacT314385AY.40.000489
ORF1ab/nsp285T85TacCacA68385AY.40.000106
ORF1ab/nsp285T85TacCacG3385AY.40.000005
ORF1ab/nsp285T85TacCacT260266AY.430.001152
ORF1ab/nsp285T85TacCacA6266AY.430.000027
ORF1ab/nsp285T85TacCacT116207AY.440.000706
ORF1ab/nsp285T85TacCacA91207AY.440.000554
ORF1ab/nsp285T85TacCacT160168B.10.001466
ORF1ab/nsp285T85TacCacA5168B.10.000046
ORF1ab/nsp285T85TacCacG3168B.10.000027
ORF1ab/nsp285T85TacCacT120123AY.1030.000745
ORF1ab/nsp285T85TacCacA2123AY.1030.000012
ORF1ab/nsp285T85TacCacG1123AY.1030.000006
ORF1ab/nsp285T85TacCacT122122B.1.2340.016097
ORF1ab/nsp285T85TacCacT109109B.1.1770.001435
ORF1ab/nsp285T85TacCacT9094AY.250.000541
ORF1ab/nsp285T85TacCacA494AY.250.000024
ORF1ab/nsp285T85TacCacT9090N.50.159011
ORF1ab/nsp285T85TacCacT8385P.10.001308
ORF1ab/nsp285T85TacCacG185P.10.000016
ORF1ab/nsp285T85TacCacA185P.10.000016
ORF1ab/nsp285T85TacCacT6062AY.1020.001591
ORF1ab/nsp285T85TacCacA262AY.1020.000053
ORF1ab/nsp285T85TacCacT5555B.1.1.2901
ORF1ab/nsp285T85TacCacT5050AY.1190.001765
ORF1ab/nsp285T85TacCacT4646AY.420.001851
ORF1ab/nsp285T85TacCacT4545B.1.1.5190.001787
ORF1ab/nsp285T85TacCacT4141AY.330.002738
ORF1ab/nsp285T85TacCacT4141B.1.177.820.01957
ORF1ab/nsp285T85TacCacT3939B.1.2430.002714
ORF1ab/nsp285T85TacCacT3737AY.340.003588
ORF1ab/nsp285T85TacCacT3434AY.140.002992
ORF1ab/nsp285T85TacCacT3234B.1.10.000581
ORF1ab/nsp285T85TacCacA234B.1.10.000036
ORF1ab/nsp285T85TacCacT2828AY.5.30.009447
ORF1ab/nsp285T85TacCacT2828B.1.160.160.026022
ORF1ab/nsp285T85TacCacT2727B.1.1600.000842
ORF1ab/nsp285T85TacCacT2426AY.30.000239
ORF1ab/nsp285T85TacCacG226AY.30.00002
ORF1ab/nsp285T85TacCacT2626B.1.177.150.016404
ORF1ab/nsp285T85TacCacT2525AY.1000.00115
ORF1ab/nsp285T85TacCacT2525AY.200.000972
ORF1ab/nsp285T85TacCacT2424B.1.360.003502
ORF1ab/nsp285T85TacCacT2223AY.4.20.000477
ORF1ab/nsp285T85TacCacA123AY.4.20.000022
ORF1ab/nsp285T85TacCacT2323B.1.1.2220.004692
ORF1ab/nsp285T85TacCacT2323P.20.004293
ORF1ab/nsp285T85TacCacT2121AY.230.001465
ORF1ab/nsp285T85TacCacT2121C.370.002437
ORF1ab/nsp285T85TacCacT1819AY.390.000445
ORF1ab/nsp285T85TacCacA119AY.390.000025
ORF1ab/nsp285T85TacCacT1818B.1.1.1330.152542
ORF1ab/nsp285T85TacCacT1717AY.290.000268
ORF1ab/nsp285T85TacCacT1717B.1.177.330.027961
ORF1ab/nsp285T85TacCacT1416AY.260.000396
ORF1ab/nsp285T85TacCacG116AY.260.000028
ORF1ab/nsp285T85TacCacA116AY.260.000028
ORF1ab/nsp285T85TacCacT1515B.1.177.100.013169
ORF1ab/nsp285T85TacCacT1515B.1.177.160.009967
ORF1ab/nsp285T85TacCacT1515B.1.6210.001328
ORF1ab/nsp285T85TacCacT1314B.1.1.2140.000721
ORF1ab/nsp285T85TacCacA114B.1.1.2140.000055
ORF1ab/nsp285T85TacCacT1414B.1.2580.000932
ORF1ab/nsp285T85TacCacT1414B.1.5250.001584
ORF1ab/nsp285T85TacCacT913AY.3.10.000767
ORF1ab/nsp285T85TacCacG413AY.3.10.000341
ORF1ab/nsp285T85TacCacT1313AY.50.000268
ORF1ab/nsp285T85TacCacT1213AY.750.000672
ORF1ab/nsp285T85TacCacA113AY.750.000056
ORF1ab/nsp285T85TacCacT1112AY.98.10.000533
ORF1ab/nsp285T85TacCacA112AY.98.10.000048
ORF1ab/nsp285T85TacCacT1212C.350.009288
ORF1ab/nsp285T85TacCacT1111B.1.177.70.001813
ORF1ab/nsp285T85TacCacT1111B.1.4000.004719
ORF1ab/nsp285T85TacCacT1010A.23.10.007042
ORF1ab/nsp285T85TacCacT1010AY.1180.000626
ORF1ab/nsp285T85TacCacT1010AY.60.000411
ORF1ab/nsp285T85TacCacT910AY.610.000943
ORF1ab/nsp285T85TacCacA110AY.610.000105
ORF1ab/nsp285T85TacCacT1010AY.670.004643
ORF1ab/nsp285T85TacCacA99AY.5.40.00249
ORF1ab/nsp285T85TacCacT99AY.740.001041
ORF1ab/nsp285T85TacCacT99B.1.177.690.013353
ORF1ab/nsp285T85TacCacT88AY.1170.000676
ORF1ab/nsp285T85TacCacT47AY.1200.000149
ORF1ab/nsp285T85TacCacG27AY.1200.000074
ORF1ab/nsp285T85TacCacA17AY.1200.000037
ORF1ab/nsp285T85TacCacT77AY.460.000729
ORF1ab/nsp285T85TacCacT57B0.000639
ORF1ab/nsp285T85TacCacA27B0.000256
ORF1ab/nsp285T85TacCacT77B.1.177.740.106061
ORF1ab/nsp285T85TacCacT77B.1.438.10.000751
ORF1ab/nsp285T85TacCacT77B.1.5440.042169
ORF1ab/nsp285T85TacCacT66AY.540.000572
ORF1ab/nsp285T85TacCacT66AZ.30.009119
ORF1ab/nsp285T85TacCacT66B.1.20.000053
ORF1ab/nsp285T85TacCacT66B.1.2210.000426
ORF1ab/nsp285T85TacCacT66B.1.258.170.000624
ORF1ab/nsp285T85TacCacA56B.1.36.290.002587
ORF1ab/nsp285T85TacCacT16B.1.36.290.000517
ORF1ab/nsp285T85TacCacT66B.1.619.10.003849
ORF1ab/nsp285T85TacCacA55AY.1100.000563
ORF1ab/nsp285T85TacCacT55AY.450.000608
ORF1ab/nsp285T85TacCacT55AY.7.20.002796
ORF1ab/nsp285T85TacCacT55AY.75.10.000902
ORF1ab/nsp285T85TacCacT55B.1.1.2940.006329
ORF1ab/nsp285T85TacCacT55B.1.177.600.001092
ORF1ab/nsp285T85TacCacT55B.1.36.220.006039
ORF1ab/nsp285T85TacCacT55B.1.617.10.000645
ORF1ab/nsp285T85TacCacA45Q.10.000505
ORF1ab/nsp285T85TacCacT15Q.10.000126
ORF1ab/nsp285T85TacCacT34AY.1160.00086
ORF1ab/nsp285T85TacCacA14AY.1160.000287
ORF1ab/nsp285T85TacCacT44AY.46.40.000658
ORF1ab/nsp285T85TacCacT44AY.530.00115
ORF1ab/nsp285T85TacCacT44AY.690.000747
ORF1ab/nsp285T85TacCacT44AY.90.00027
ORF1ab/nsp285T85TacCacT44B.1.1.330.001684
ORF1ab/nsp285T85TacCacT44B.1.177.860.000734
ORF1ab/nsp285T85TacCacT44B.1.2400.000862
ORF1ab/nsp285T85TacCacT44C.160.004242
ORF1ab/nsp285T85TacCacT34P.1.120.001452
ORF1ab/nsp285T85TacCacG14P.1.120.000484
ORF1ab/nsp285T85TacCacT44P.1.140.000191
ORF1ab/nsp285T85TacCacT44Q.80.00066
ORF1ab/nsp285T85TacCacT44R.10.00036
ORF1ab/nsp285T85TacCacT33AY.1060.001005
ORF1ab/nsp285T85TacCacT33AY.1090.002219
ORF1ab/nsp285T85TacCacT33AY.1130.000427
ORF1ab/nsp285T85TacCacT33AY.1210.000406
ORF1ab/nsp285T85TacCacT23AY.34.10.00102
ORF1ab/nsp285T85TacCacA13AY.34.10.00051
ORF1ab/nsp285T85TacCacT33AY.350.000699
ORF1ab/nsp285T85TacCacT33AY.46.10.00308
ORF1ab/nsp285T85TacCacT33AY.470.000093
ORF1ab/nsp285T85TacCacT33AY.590.001589
ORF1ab/nsp285T85TacCacT23AY.680.000547
ORF1ab/nsp285T85TacCacA13AY.680.000274
ORF1ab/nsp285T85TacCacT33AY.890.014706
ORF1ab/nsp285T85TacCacT33AY.99.20.000276
ORF1ab/nsp285T85TacCacT33B.1.1.2630.004673
ORF1ab/nsp285T85TacCacT33B.1.220.003953
ORF1ab/nsp285T85TacCacA23B.1.36.160.002849
ORF1ab/nsp285T85TacCacT13B.1.36.160.001425
ORF1ab/nsp285T85TacCacT33B.1.4620.021739
ORF1ab/nsp285T85TacCacA23B.1.466.20.000782
ORF1ab/nsp285T85TacCacT13B.1.466.20.000391
ORF1ab/nsp285T85TacCacT33B.1.4700.004213
ORF1ab/nsp285T85TacCacT33B.400.001093
ORF1ab/nsp285T85TacCacT33P.1.150.000697
ORF1ab/nsp285T85TacCacT33P.1.170.000485
ORF1ab/nsp285T85TacCacT220.111111
ORF1ab/nsp285T85TacCacT22A0.000774
ORF1ab/nsp285T85TacCacT22AY.1140.000462
ORF1ab/nsp285T85TacCacA12AY.120.000316
ORF1ab/nsp285T85TacCacT12AY.120.000316
ORF1ab/nsp285T85TacCacT22AY.130.000322
ORF1ab/nsp285T85TacCacT22AY.16.10.00094
ORF1ab/nsp285T85TacCacT12AY.240.000431
ORF1ab/nsp285T85TacCacA12AY.240.000431
ORF1ab/nsp285T85TacCacT22AY.360.000296
ORF1ab/nsp285T85TacCacT22AY.39.10.000079
ORF1ab/nsp285T85TacCacT22AY.4.30.001684
ORF1ab/nsp285T85TacCacT22AY.46.60.000144
ORF1ab/nsp285T85TacCacT22AY.700.000417
ORF1ab/nsp285T85TacCacT22AY.850.000854
ORF1ab/nsp285T85TacCacT22AY.9.20.000073
ORF1ab/nsp285T85TacCacT22AY.930.000546
ORF1ab/nsp285T85TacCacT22AY.980.000158
ORF1ab/nsp285T85TacCacT22B.1.1.1410.004024
ORF1ab/nsp285T85TacCacT22B.1.1.1760.000879
ORF1ab/nsp285T85TacCacT22B.1.1.2690.002706
ORF1ab/nsp285T85TacCacT22B.1.1.2860.005797
ORF1ab/nsp285T85TacCacT22B.1.1.3260.003521
ORF1ab/nsp285T85TacCacT22B.1.1.3440.021505
ORF1ab/nsp285T85TacCacT22B.1.1.390.001019
ORF1ab/nsp285T85TacCacT22B.1.1.3970.004505
ORF1ab/nsp285T85TacCacT22B.1.160.260.004843
ORF1ab/nsp285T85TacCacT22B.1.177.350.001382
ORF1ab/nsp285T85TacCacT22B.1.177.570.000562
ORF1ab/nsp285T85TacCacG22B.1.177.730.001133
ORF1ab/nsp285T85TacCacT22B.1.177.810.000379
ORF1ab/nsp285T85TacCacT22B.1.230.012121
ORF1ab/nsp285T85TacCacT22B.1.36.330.015152
ORF1ab/nsp285T85TacCacT22B.1.3980.005952
ORF1ab/nsp285T85TacCacT22B.1.4290.000047
ORF1ab/nsp285T85TacCacT22B.1.5960.000174
ORF1ab/nsp285T85TacCacT22B.1.6200.001892
ORF1ab/nsp285T85TacCacT22B.1.6280.000705
ORF1ab/nsp285T85TacCacT22B.30.001661
ORF1ab/nsp285T85TacCacT22B.450.007663
ORF1ab/nsp285T85TacCacT22N.90.011905
ORF1ab/nsp285T85TacCacT22P.1.160.000748
ORF1ab/nsp285T85TacCacT11A.2.20.001689
ORF1ab/nsp285T85TacCacA11A.30.002096
ORF1ab/nsp285T85TacCacT11AU.30.00211
ORF1ab/nsp285T85TacCacT11AY.10.000396
ORF1ab/nsp285T85TacCacT11AY.120.2.10.000498
ORF1ab/nsp285T85TacCacT11AY.160.00038
ORF1ab/nsp285T85TacCacT11AY.190.00114
ORF1ab/nsp285T85TacCacT11AY.370.000316
ORF1ab/nsp285T85TacCacT11AY.4.50.000107
ORF1ab/nsp285T85TacCacT11AY.550.000917
ORF1ab/nsp285T85TacCacT11AY.620.000436
ORF1ab/nsp285T85TacCacT11AY.7.10.000113
ORF1ab/nsp285T85TacCacT11AY.760.004831
ORF1ab/nsp285T85TacCacT11AY.790.001211
ORF1ab/nsp285T85TacCacT11AY.840.000437
ORF1ab/nsp285T85TacCacT11AY.900.000684
ORF1ab/nsp285T85TacCacT11AY.910.00073
ORF1ab/nsp285T85TacCacT11AY.920.000287
ORF1ab/nsp285T85TacCacT11AY.950.000761
ORF1ab/nsp285T85TacCacT11AY.990.001049
ORF1ab/nsp285T85TacCacT11AY.99.10.001553
ORF1ab/nsp285T85TacCacT11B.1.1.10.000327
ORF1ab/nsp285T85TacCacT11B.1.1.100.001115
ORF1ab/nsp285T85TacCacT11B.1.1.1610.003534
ORF1ab/nsp285T85TacCacT11B.1.1.1920.002309
ORF1ab/nsp285T85TacCacT11B.1.1.2160.00089
ORF1ab/nsp285T85TacCacT11B.1.1.2200.001859
ORF1ab/nsp285T85TacCacT11B.1.1.2310.003096
ORF1ab/nsp285T85TacCacT11B.1.1.2530.002506
ORF1ab/nsp285T85TacCacT11B.1.1.2790.001121
ORF1ab/nsp285T85TacCacT11B.1.1.280.000311
ORF1ab/nsp285T85TacCacT11B.1.1.2840.000107
ORF1ab/nsp285T85TacCacT11B.1.1.2910.000742
ORF1ab/nsp285T85TacCacT11B.1.1.3030.002762
ORF1ab/nsp285T85TacCacT11B.1.1.3170.000412
ORF1ab/nsp285T85TacCacT11B.1.1.3330.001076
ORF1ab/nsp285T85TacCacT11B.1.1.3620.005618
ORF1ab/nsp285T85TacCacT11B.1.1.3690.000446
ORF1ab/nsp285T85TacCacA11B.1.1.370.000193
ORF1ab/nsp285T85TacCacT11B.1.1.4340.000349
ORF1ab/nsp285T85TacCacT11B.1.1.4860.001577
ORF1ab/nsp285T85TacCacA11B.1.1180.006711
ORF1ab/nsp285T85TacCacT11B.1.1310.008772
ORF1ab/nsp285T85TacCacT11B.1.1470.000756
ORF1ab/nsp285T85TacCacT11B.1.1580.02381
ORF1ab/nsp285T85TacCacA11B.1.160.140.002119
ORF1ab/nsp285T85TacCacT11B.1.160.180.007299
ORF1ab/nsp285T85TacCacT11B.1.1640.014925
ORF1ab/nsp285T85TacCacT11B.1.177.120.000152
ORF1ab/nsp285T85TacCacT11B.1.177.230.003236
ORF1ab/nsp285T85TacCacT11B.1.177.40.000211
ORF1ab/nsp285T85TacCacT11B.1.177.510.004566
ORF1ab/nsp285T85TacCacT11B.1.177.620.001192
ORF1ab/nsp285T85TacCacT11B.1.177.830.001481
ORF1ab/nsp285T85TacCacT11B.1.2060.000816
ORF1ab/nsp285T85TacCacT11B.1.2150.009615
ORF1ab/nsp285T85TacCacT11B.1.2390.001221
ORF1ab/nsp285T85TacCacT11B.1.2410.000812
ORF1ab/nsp285T85TacCacT11B.1.2470.014925
ORF1ab/nsp285T85TacCacT11B.1.258.110.000396
ORF1ab/nsp285T85TacCacT11B.1.258.70.001912
ORF1ab/nsp285T85TacCacT11B.1.2790.000514
ORF1ab/nsp285T85TacCacT11B.1.3110.000275
ORF1ab/nsp285T85TacCacT11B.1.3750.00082
ORF1ab/nsp285T85TacCacT11B.1.3800.006623
ORF1ab/nsp285T85TacCacT11B.1.3890.001002
ORF1ab/nsp285T85TacCacT11B.1.3950.007042
ORF1ab/nsp285T85TacCacT11B.1.3960.000706
ORF1ab/nsp285T85TacCacT11B.1.4080.00369
ORF1ab/nsp285T85TacCacT11B.1.4090.000781
ORF1ab/nsp285T85TacCacT11B.1.4360.001029
ORF1ab/nsp285T85TacCacT11B.1.4410.009615
ORF1ab/nsp285T85TacCacT11B.1.4590.004082
ORF1ab/nsp285T85TacCacT11B.1.4630.008065
ORF1ab/nsp285T85TacCacT11B.1.4680.005714
ORF1ab/nsp285T85TacCacT11B.1.4690.00361
ORF1ab/nsp285T85TacCacT11B.1.4730.019231
ORF1ab/nsp285T85TacCacT11B.1.5660.019231
ORF1ab/nsp285T85TacCacT11B.1.5770.000687
ORF1ab/nsp285T85TacCacT11B.1.5800.004065
ORF1ab/nsp285T85TacCacT11B.1.5820.000491
ORF1ab/nsp285T85TacCacT11B.1.6090.000479
ORF1ab/nsp285T85TacCacT11B.1.621.10.000506
ORF1ab/nsp285T85TacCacT11B.1.6230.000536
ORF1ab/nsp285T85TacCacT11B.1.6310.003367
ORF1ab/nsp285T85TacCacT11B.1.760.011364
ORF1ab/nsp285T85TacCacT11B.1.930.000934
ORF1ab/nsp285T85TacCacT11B.6.60.000889
ORF1ab/nsp285T85TacCacT11C.360.000911
ORF1ab/nsp285T85TacCacT11C.36.30.000567
ORF1ab/nsp285T85TacCacT11D.20.000075
ORF1ab/nsp285T85TacCacT11Q.30.000145