CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T632T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2632T632TT812TsynacCacT308617560.5690212699-2701
ORF1ab/nsp2632T632TT812TsynacCacA308613000.4212572699-2701
ORF1ab/nsp2632T632TT812TsynacCacG3086300.009721322699-2701

Details of the mutation T632T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2632T632TacCacT17563086All0.000336
ORF1ab/nsp2632T632TacCacA13003086All0.000249
ORF1ab/nsp2632T632TacCacG303086All0.000006
ORF1ab/nsp2632T632TacCacA832834AY.460.086595
ORF1ab/nsp2632T632TacCacT2834AY.460.000208
ORF1ab/nsp2632T632TacCacT600600AY.50.01239
ORF1ab/nsp2632T632TacCacA287291AY.420.011546
ORF1ab/nsp2632T632TacCacT4291AY.420.000161
ORF1ab/nsp2632T632TacCacT187207B.1.1.70.000167
ORF1ab/nsp2632T632TacCacA19207B.1.1.70.000017
ORF1ab/nsp2632T632TacCacG1207B.1.1.70.000001
ORF1ab/nsp2632T632TacCacT124124B.1.6280.043693
ORF1ab/nsp2632T632TacCacT120121AY.98.10.005812
ORF1ab/nsp2632T632TacCacA1121AY.98.10.000048
ORF1ab/nsp2632T632TacCacT99101AY.1030.000615
ORF1ab/nsp2632T632TacCacA2101AY.1030.000012
ORF1ab/nsp2632T632TacCacT6575AY.40.000101
ORF1ab/nsp2632T632TacCacA1075AY.40.000016
ORF1ab/nsp2632T632TacCacT4353B.10.000394
ORF1ab/nsp2632T632TacCacA1053B.10.000092
ORF1ab/nsp2632T632TacCacA4448B.1.1770.000579
ORF1ab/nsp2632T632TacCacT448B.1.1770.000053
ORF1ab/nsp2632T632TacCacT4047B.1.617.20.000151
ORF1ab/nsp2632T632TacCacA747B.1.617.20.000026
ORF1ab/nsp2632T632TacCacT3636AY.250.000217
ORF1ab/nsp2632T632TacCacT3434AY.1180.00213
ORF1ab/nsp2632T632TacCacT3434B.1.1.930.871795
ORF1ab/nsp2632T632TacCacT2127AY.430.000093
ORF1ab/nsp2632T632TacCacA627AY.430.000027
ORF1ab/nsp2632T632TacCacT2727B.1.5260.000635
ORF1ab/nsp2632T632TacCacG2626AY.99.20.002396
ORF1ab/nsp2632T632TacCacT2326B.1.20.000203
ORF1ab/nsp2632T632TacCacA326B.1.20.000026
ORF1ab/nsp2632T632TacCacA2023AY.230.001395
ORF1ab/nsp2632T632TacCacT323AY.230.000209
ORF1ab/nsp2632T632TacCacT2020AY.1200.000744
ORF1ab/nsp2632T632TacCacT1617B.1.4270.000808
ORF1ab/nsp2632T632TacCacA117B.1.4270.00005
ORF1ab/nsp2632T632TacCacT1215AY.30.000119
ORF1ab/nsp2632T632TacCacA215AY.30.00002
ORF1ab/nsp2632T632TacCacG115AY.30.00001
ORF1ab/nsp2632T632TacCacT1515C.340.555556
ORF1ab/nsp2632T632TacCacT1414B.1.177.480.04375
ORF1ab/nsp2632T632TacCacA713AY.440.000043
ORF1ab/nsp2632T632TacCacT613AY.440.000037
ORF1ab/nsp2632T632TacCacT1313B.1.177.810.002461
ORF1ab/nsp2632T632TacCacT1213P.10.000189
ORF1ab/nsp2632T632TacCacA113P.10.000016
ORF1ab/nsp2632T632TacCacT1212B.1.1.5190.000477
ORF1ab/nsp2632T632TacCacT1212B.1.5950.003132
ORF1ab/nsp2632T632TacCacA99B.1.1.2980.007759
ORF1ab/nsp2632T632TacCacT99B.1.36.290.004656
ORF1ab/nsp2632T632TacCacA88AY.1060.002679
ORF1ab/nsp2632T632TacCacT88B.1.6370.000585
ORF1ab/nsp2632T632TacCacT67AY.1020.000159
ORF1ab/nsp2632T632TacCacA17AY.1020.000027
ORF1ab/nsp2632T632TacCacT66AY.680.001642
ORF1ab/nsp2632T632TacCacT55AY.240.002155
ORF1ab/nsp2632T632TacCacT55AY.5.20.012315
ORF1ab/nsp2632T632TacCacA44B.1.3460.005242
ORF1ab/nsp2632T632TacCacA34B.1.5960.000261
ORF1ab/nsp2632T632TacCacG14B.1.5960.000087
ORF1ab/nsp2632T632TacCacT33AY.1140.000693
ORF1ab/nsp2632T632TacCacT23AY.1170.000169
ORF1ab/nsp2632T632TacCacA13AY.1170.000085
ORF1ab/nsp2632T632TacCacT23AY.140.000176
ORF1ab/nsp2632T632TacCacA13AY.140.000088
ORF1ab/nsp2632T632TacCacT23AY.200.000078
ORF1ab/nsp2632T632TacCacA13AY.200.000039
ORF1ab/nsp2632T632TacCacT33AY.46.60.000217
ORF1ab/nsp2632T632TacCacT23AY.60.000082
ORF1ab/nsp2632T632TacCacA13AY.60.000041
ORF1ab/nsp2632T632TacCacA33AY.9.20.00011
ORF1ab/nsp2632T632TacCacA23B0.000256
ORF1ab/nsp2632T632TacCacT13B0.000128
ORF1ab/nsp2632T632TacCacT33B.1.10.000054
ORF1ab/nsp2632T632TacCacT33B.1.1.2140.000166
ORF1ab/nsp2632T632TacCacT33B.1.1.2220.000612
ORF1ab/nsp2632T632TacCacT23B.1.1600.000062
ORF1ab/nsp2632T632TacCacA13B.1.1600.000031
ORF1ab/nsp2632T632TacCacT33B.1.2580.0002
ORF1ab/nsp2632T632TacCacT33B.1.4290.000071
ORF1ab/nsp2632T632TacCacT33B.1.6210.000266
ORF1ab/nsp2632T632TacCacT22A.2.50.000998
ORF1ab/nsp2632T632TacCacA12AY.1000.000046
ORF1ab/nsp2632T632TacCacT12AY.1000.000046
ORF1ab/nsp2632T632TacCacT22AY.260.000057
ORF1ab/nsp2632T632TacCacT22AY.290.000032
ORF1ab/nsp2632T632TacCacT22AY.340.000194
ORF1ab/nsp2632T632TacCacT22AY.4.20.000043
ORF1ab/nsp2632T632TacCacT22AY.4.50.000215
ORF1ab/nsp2632T632TacCacT12AY.650.000533
ORF1ab/nsp2632T632TacCacA12AY.650.000533
ORF1ab/nsp2632T632TacCacA22B.1.1.1570.001826
ORF1ab/nsp2632T632TacCacT22B.1.1.2160.001781
ORF1ab/nsp2632T632TacCacT22B.1.1.4090.005666
ORF1ab/nsp2632T632TacCacT22B.1.1.4520.222222
ORF1ab/nsp2632T632TacCacT22B.1.1880.033333
ORF1ab/nsp2632T632TacCacT22B.1.4220.001625
ORF1ab/nsp2632T632TacCacT22B.1.5090.001732
ORF1ab/nsp2632T632TacCacT22P.1.20.002312
ORF1ab/nsp2632T632TacCacT22P.20.000373
ORF1ab/nsp2632T632TacCacT11A0.000387
ORF1ab/nsp2632T632TacCacT11A.50.001923
ORF1ab/nsp2632T632TacCacT11AE.10.011364
ORF1ab/nsp2632T632TacCacT11AY.1070.000466
ORF1ab/nsp2632T632TacCacT11AY.1080.001103
ORF1ab/nsp2632T632TacCacT11AY.1130.000142
ORF1ab/nsp2632T632TacCacA11AY.1190.000035
ORF1ab/nsp2632T632TacCacT11AY.1210.000135
ORF1ab/nsp2632T632TacCacA11AY.130.000161
ORF1ab/nsp2632T632TacCacT11AY.160.00038
ORF1ab/nsp2632T632TacCacT11AY.190.00114
ORF1ab/nsp2632T632TacCacA11AY.320.000532
ORF1ab/nsp2632T632TacCacT11AY.330.000067
ORF1ab/nsp2632T632TacCacT11AY.370.000316
ORF1ab/nsp2632T632TacCacT11AY.390.000025
ORF1ab/nsp2632T632TacCacT11AY.4.40.000409
ORF1ab/nsp2632T632TacCacA11AY.400.000964
ORF1ab/nsp2632T632TacCacT11AY.450.000122
ORF1ab/nsp2632T632TacCacT11AY.46.20.000635
ORF1ab/nsp2632T632TacCacT11AY.5.30.000337
ORF1ab/nsp2632T632TacCacT11AY.5.40.000277
ORF1ab/nsp2632T632TacCacT11AY.540.000095
ORF1ab/nsp2632T632TacCacT11AY.610.000105
ORF1ab/nsp2632T632TacCacT11AY.7.10.000113
ORF1ab/nsp2632T632TacCacA11AY.710.000475
ORF1ab/nsp2632T632TacCacT11AY.740.000116
ORF1ab/nsp2632T632TacCacT11AY.840.000437
ORF1ab/nsp2632T632TacCacT11AY.90.000068
ORF1ab/nsp2632T632TacCacT11AY.980.000079
ORF1ab/nsp2632T632TacCacT11B.1.1.1170.009709
ORF1ab/nsp2632T632TacCacT11B.1.1.2050.003717
ORF1ab/nsp2632T632TacCacT11B.1.1.2770.000759
ORF1ab/nsp2632T632TacCacT11B.1.1.2840.000107
ORF1ab/nsp2632T632TacCacT11B.1.1.3020.002075
ORF1ab/nsp2632T632TacCacT11B.1.1.330.000421
ORF1ab/nsp2632T632TacCacT11B.1.1.4110.014706
ORF1ab/nsp2632T632TacCacT11B.1.1.4200.001006
ORF1ab/nsp2632T632TacCacT11B.1.1.500.000679
ORF1ab/nsp2632T632TacCacT11B.1.160.280.002924
ORF1ab/nsp2632T632TacCacT11B.1.177.440.000519
ORF1ab/nsp2632T632TacCacT11B.1.177.540.000606
ORF1ab/nsp2632T632TacCacT11B.1.177.60.000977
ORF1ab/nsp2632T632TacCacA11B.1.177.600.000218
ORF1ab/nsp2632T632TacCacT11B.1.177.730.000566
ORF1ab/nsp2632T632TacCacT11B.1.177.860.000183
ORF1ab/nsp2632T632TacCacT11B.1.1890.004292
ORF1ab/nsp2632T632TacCacG11B.1.2140.003663
ORF1ab/nsp2632T632TacCacT11B.1.2350.002519
ORF1ab/nsp2632T632TacCacT11B.1.2390.001221
ORF1ab/nsp2632T632TacCacT11B.1.2430.00007
ORF1ab/nsp2632T632TacCacT11B.1.3510.00003
ORF1ab/nsp2632T632TacCacA11B.1.351.30.000876
ORF1ab/nsp2632T632TacCacT11B.1.360.000146
ORF1ab/nsp2632T632TacCacT11B.1.36.190.009259
ORF1ab/nsp2632T632TacCacA11B.1.3960.000706
ORF1ab/nsp2632T632TacCacT11B.1.5600.00463
ORF1ab/nsp2632T632TacCacT11B.60.00091
ORF1ab/nsp2632T632TacCacA11C.160.00106
ORF1ab/nsp2632T632TacCacT11C.370.000116
ORF1ab/nsp2632T632TacCacT11P.1.120.000484
ORF1ab/nsp2632T632TacCacT11P.1.160.000374
ORF1ab/nsp2632T632TacCacT11P.1.70.000319
ORF1ab/nsp2632T632TacCacT11P.1.80.004785
ORF1ab/nsp2632T632TacCacT11Z.10.00289