CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T547I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2547T547IT727InonsynaCtaTt940294010.9998942444-2446
ORF1ab/nsp2547T547IT727InonsynaCTaTC940210.000106362444-2446

Details of the mutation T547I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2547T547IaCtaTt94019402All0.001798
ORF1ab/nsp2547T547IaCTaTC19402All0
ORF1ab/nsp2547T547IaCtaTt14801480AY.40.002304
ORF1ab/nsp2547T547IaCtaTt963963B.1.1.70.000862
ORF1ab/nsp2547T547IaCtaTt835835B.1.20.007352
ORF1ab/nsp2547T547IaCtaTt818818AY.250.00492
ORF1ab/nsp2547T547IaCtaTt487487P.10.007672
ORF1ab/nsp2547T547IaCtaTt445445B.1.617.20.001676
ORF1ab/nsp2547T547IaCtaTt356356P.1.10.113088
ORF1ab/nsp2547T547IaCtaTt317317AY.1020.008405
ORF1ab/nsp2547T547IaCtaTt258258B.1.1.3370.928058
ORF1ab/nsp2547T547IaCtaTt217217B.1.1.4291
ORF1ab/nsp2547T547IaCtaTt200200B.1.10.003628
ORF1ab/nsp2547T547IaCtaTt187187B.10.001713
ORF1ab/nsp2547T547IaCtaTt157157AY.430.000696
ORF1ab/nsp2547T547IaCtaTt153153AY.1170.012931
ORF1ab/nsp2547T547IaCtaTt130130B.1.1.2360.896552
ORF1ab/nsp2547T547IaCtaTt124124B.1.4210.925373
ORF1ab/nsp2547T547IaCtaTt9495AY.440.000572
ORF1ab/nsp2547T547IaCTaTC195AY.440.000006
ORF1ab/nsp2547T547IaCtaTt8787AY.470.002706
ORF1ab/nsp2547T547IaCtaTt8181AY.120.025601
ORF1ab/nsp2547T547IaCtaTt7272AY.1030.000447
ORF1ab/nsp2547T547IaCtaTt7171B.1.1770.000935
ORF1ab/nsp2547T547IaCtaTt7171B.1.3510.002111
ORF1ab/nsp2547T547IaCtaTt6464B.1.1.2140.003549
ORF1ab/nsp2547T547IaCtaTt6363B.1.4270.003181
ORF1ab/nsp2547T547IaCtaTt5959B.1.4290.001388
ORF1ab/nsp2547T547IaCtaTt5858B.1.1.5190.002303
ORF1ab/nsp2547T547IaCtaTt5353B.1.1.370.010222
ORF1ab/nsp2547T547IaCtaTt4747AY.30.000467
ORF1ab/nsp2547T547IaCtaTt4545AY.9.10.003768
ORF1ab/nsp2547T547IaCtaTt4141AY.1000.001886
ORF1ab/nsp2547T547IaCtaTt4141AY.390.001013
ORF1ab/nsp2547T547IaCtaTt3939B.1.5750.011833
ORF1ab/nsp2547T547IaCtaTt3737B.1.177.120.005613
ORF1ab/nsp2547T547IaCtaTt3535B.1.5260.000823
ORF1ab/nsp2547T547IaCtaTt3434AY.4.30.02862
ORF1ab/nsp2547T547IaCtaTt3333AY.230.002302
ORF1ab/nsp2547T547IaCtaTt3333AY.50.000681
ORF1ab/nsp2547T547IaCtaTt3131AY.260.000878
ORF1ab/nsp2547T547IaCtaTt3030P.1.140.001434
ORF1ab/nsp2547T547IaCtaTt2929B.1.6370.002119
ORF1ab/nsp2547T547IaCtaTt2727B.1.177.210.002065
ORF1ab/nsp2547T547IaCtaTt2424AY.1160.006883
ORF1ab/nsp2547T547IaCtaTt2323B.1.5960.002004
ORF1ab/nsp2547T547IaCtaTt2222B.1.2580.001464
ORF1ab/nsp2547T547IaCtaTt2020AY.1190.000706
ORF1ab/nsp2547T547IaCtaTt2020AY.460.002082
ORF1ab/nsp2547T547IaCtaTt1919AY.840.008311
ORF1ab/nsp2547T547IaCtaTt1919B.1.1600.000593
ORF1ab/nsp2547T547IaCtaTt1818AY.130.002898
ORF1ab/nsp2547T547IaCtaTt1818B.1.360.002626
ORF1ab/nsp2547T547IaCtaTt1717AY.1180.001065
ORF1ab/nsp2547T547IaCtaTt1717AY.140.001496
ORF1ab/nsp2547T547IaCtaTt1717AY.46.60.001228
ORF1ab/nsp2547T547IaCtaTt1616AY.290.000252
ORF1ab/nsp2547T547IaCtaTt1616AY.540.001526
ORF1ab/nsp2547T547IaCtaTt1616AY.98.10.000775
ORF1ab/nsp2547T547IaCtaTt1616B.1.1.2820.186047
ORF1ab/nsp2547T547IaCtaTt1616C.370.001857
ORF1ab/nsp2547T547IaCtaTt1414AY.1200.000521
ORF1ab/nsp2547T547IaCtaTt1414AY.200.000544
ORF1ab/nsp2547T547IaCtaTt1414AY.4.20.000304
ORF1ab/nsp2547T547IaCtaTt1313AY.1210.001759
ORF1ab/nsp2547T547IaCtaTt1313AY.370.004109
ORF1ab/nsp2547T547IaCtaTt1313B.1.1.1760.005712
ORF1ab/nsp2547T547IaCtaTt1313P.1.120.006292
ORF1ab/nsp2547T547IaCtaTt1313P.1.160.004863
ORF1ab/nsp2547T547IaCtaTt1212B.1.177.810.002272
ORF1ab/nsp2547T547IaCtaTt1212B.1.5580.054795
ORF1ab/nsp2547T547IaCtaTt1111AY.480.005116
ORF1ab/nsp2547T547IaCtaTt1111AY.950.008371
ORF1ab/nsp2547T547IaCtaTt1111B.1.1.3480.008758
ORF1ab/nsp2547T547IaCtaTt1111B.1.36.170.005435
ORF1ab/nsp2547T547IaCtaTt1010AY.920.002873
ORF1ab/nsp2547T547IaCtaTt99AY.270.000582
ORF1ab/nsp2547T547IaCtaTt99AY.330.000601
ORF1ab/nsp2547T547IaCtaTt88AY.190.009122
ORF1ab/nsp2547T547IaCtaTt88AY.450.000973
ORF1ab/nsp2547T547IaCtaTt88B.1.1.2840.000859
ORF1ab/nsp2547T547IaCtaTt88B.1.5030.0199
ORF1ab/nsp2547T547IaCtaTt88D.20.0006
ORF1ab/nsp2547T547IaCtaTt77AJ.10.318182
ORF1ab/nsp2547T547IaCtaTt77AY.350.001631
ORF1ab/nsp2547T547IaCtaTt77AY.420.000282
ORF1ab/nsp2547T547IaCtaTt77AY.9.20.000257
ORF1ab/nsp2547T547IaCtaTt77B.1.1.2910.005197
ORF1ab/nsp2547T547IaCtaTt77B.1.1.2980.006034
ORF1ab/nsp2547T547IaCtaTt66AY.4.50.000645
ORF1ab/nsp2547T547IaCtaTt66AY.610.000629
ORF1ab/nsp2547T547IaCtaTt66AY.740.000694
ORF1ab/nsp2547T547IaCtaTt66B.1.1.4160.00543
ORF1ab/nsp2547T547IaCtaTt66B.1.1.4420.111111
ORF1ab/nsp2547T547IaCtaTt66B.1.160.280.017544
ORF1ab/nsp2547T547IaCtaTt66B.1.2210.000426
ORF1ab/nsp2547T547IaCtaTt66B.1.2340.000792
ORF1ab/nsp2547T547IaCtaTt66B.1.36.290.003104
ORF1ab/nsp2547T547IaCtaTt66B.1.6210.000531
ORF1ab/nsp2547T547IaCtaTt55AY.1050.003215
ORF1ab/nsp2547T547IaCtaTt55AY.1130.000712
ORF1ab/nsp2547T547IaCtaTt55AY.360.000741
ORF1ab/nsp2547T547IaCtaTt55AY.750.00028
ORF1ab/nsp2547T547IaCtaTt55AY.980.000395
ORF1ab/nsp2547T547IaCtaTt55AZ.30.007599
ORF1ab/nsp2547T547IaCtaTt55B.1.1.2570.048544
ORF1ab/nsp2547T547IaCtaTt55B.1.1.3060.002192
ORF1ab/nsp2547T547IaCtaTt55B.1.1.5280.024038
ORF1ab/nsp2547T547IaCtaTt55B.1.177.860.000917
ORF1ab/nsp2547T547IaCtaTt55B.1.258.170.00052
ORF1ab/nsp2547T547IaCtaTt55B.1.3560.008636
ORF1ab/nsp2547T547IaCtaTt55B.1.36.180.002101
ORF1ab/nsp2547T547IaCtaTt55B.1.4000.002145
ORF1ab/nsp2547T547IaCtaTt55B.1.6090.002397
ORF1ab/nsp2547T547IaCtaTt44AY.1140.000924
ORF1ab/nsp2547T547IaCtaTt44AY.590.002119
ORF1ab/nsp2547T547IaCtaTt44B.1.1.10.001307
ORF1ab/nsp2547T547IaCtaTt44B.1.1.1890.006051
ORF1ab/nsp2547T547IaCtaTt44B.1.1.280.001245
ORF1ab/nsp2547T547IaCtaTt44B.1.1.3170.001647
ORF1ab/nsp2547T547IaCtaTt44B.1.177.820.001909
ORF1ab/nsp2547T547IaCtaTt44B.1.3140.030075
ORF1ab/nsp2547T547IaCtaTt44C.40.04
ORF1ab/nsp2547T547IaCtaTt44Q.80.00066
ORF1ab/nsp2547T547IaCtaTt33AY.1070.001398
ORF1ab/nsp2547T547IaCtaTt33AY.1110.000549
ORF1ab/nsp2547T547IaCtaTt33AY.60.000123
ORF1ab/nsp2547T547IaCtaTt33AY.680.000821
ORF1ab/nsp2547T547IaCtaTt33AY.7.10.000338
ORF1ab/nsp2547T547IaCtaTt33AY.700.000626
ORF1ab/nsp2547T547IaCtaTt33B.1.177.70.000495
ORF1ab/nsp2547T547IaCtaTt33B.1.2060.002447
ORF1ab/nsp2547T547IaCtaTt33B.1.2400.000647
ORF1ab/nsp2547T547IaCtaTt33B.1.3290.001823
ORF1ab/nsp2547T547IaCtaTt33B.1.36.160.004274
ORF1ab/nsp2547T547IaCtaTt33B.1.466.20.001174
ORF1ab/nsp2547T547IaCtaTt33B.1.5640.001278
ORF1ab/nsp2547T547IaCtaTt33B.1.5710.029126
ORF1ab/nsp2547T547IaCtaTt33B.1.5950.000783
ORF1ab/nsp2547T547IaCtaTt33K.20.12
ORF1ab/nsp2547T547IaCtaTt33N.40.012766
ORF1ab/nsp2547T547IaCtaTt33P.1.150.000697
ORF1ab/nsp2547T547IaCtaTt33P.1.170.000485
ORF1ab/nsp2547T547IaCtaTt33P.20.00056
ORF1ab/nsp2547T547IaCtaTt22AW.10.006098
ORF1ab/nsp2547T547IaCtaTt22AY.1060.00067
ORF1ab/nsp2547T547IaCtaTt22AY.1090.001479
ORF1ab/nsp2547T547IaCtaTt22AY.1100.000225
ORF1ab/nsp2547T547IaCtaTt22AY.23.10.000835
ORF1ab/nsp2547T547IaCtaTt22AY.340.000194
ORF1ab/nsp2547T547IaCtaTt22AY.380.000999
ORF1ab/nsp2547T547IaCtaTt22AY.46.20.001271
ORF1ab/nsp2547T547IaCtaTt22AY.5.40.000553
ORF1ab/nsp2547T547IaCtaTt22AY.560.00321
ORF1ab/nsp2547T547IaCtaTt22AY.7.20.001119
ORF1ab/nsp2547T547IaCtaTt22AY.990.002099
ORF1ab/nsp2547T547IaCtaTt22AY.99.20.000184
ORF1ab/nsp2547T547IaCtaTt22B0.000256
ORF1ab/nsp2547T547IaCtaTt22B.1.1.2220.000408
ORF1ab/nsp2547T547IaCtaTt22B.1.1.2690.002706
ORF1ab/nsp2547T547IaCtaTt22B.1.1.2940.002532
ORF1ab/nsp2547T547IaCtaTt22B.1.1.3110.000716
ORF1ab/nsp2547T547IaCtaTt22B.1.1.330.000842
ORF1ab/nsp2547T547IaCtaTt22B.1.1.570.022989
ORF1ab/nsp2547T547IaCtaTt22B.1.1.700.000682
ORF1ab/nsp2547T547IaCtaTt22B.1.3110.000549
ORF1ab/nsp2547T547IaCtaTt22B.1.3610.002577
ORF1ab/nsp2547T547IaCtaTt22B.1.3620.003082
ORF1ab/nsp2547T547IaCtaTt22B.1.3960.001411
ORF1ab/nsp2547T547IaCtaTt22B.1.4200.020833
ORF1ab/nsp2547T547IaCtaTt22B.1.4800.004975
ORF1ab/nsp2547T547IaCtaTt22B.1.5110.068966
ORF1ab/nsp2547T547IaCtaTt22B.1.5270.007407
ORF1ab/nsp2547T547IaCtaTt22B.1.5820.000981
ORF1ab/nsp2547T547IaCtaTt22B.1.617.10.000258
ORF1ab/nsp2547T547IaCtaTt22B.1.6340.006849
ORF1ab/nsp2547T547IaCtaTt22B.400.000729
ORF1ab/nsp2547T547IaCtaTt22C.360.001821
ORF1ab/nsp2547T547IaCtaTt22P.30.00319
ORF1ab/nsp2547T547IaCtaTt22P.60.006289
ORF1ab/nsp2547T547IaCtaTt11A0.000387
ORF1ab/nsp2547T547IaCtaTt11A.20.000662
ORF1ab/nsp2547T547IaCtaTt11A.23.10.000704
ORF1ab/nsp2547T547IaCtaTt11AY.110.001339
ORF1ab/nsp2547T547IaCtaTt11AY.120.2.10.000498
ORF1ab/nsp2547T547IaCtaTt11AY.16.10.00047
ORF1ab/nsp2547T547IaCtaTt11AY.240.000431
ORF1ab/nsp2547T547IaCtaTt11AY.3.10.000085
ORF1ab/nsp2547T547IaCtaTt11AY.300.000396
ORF1ab/nsp2547T547IaCtaTt11AY.34.10.00051
ORF1ab/nsp2547T547IaCtaTt11AY.39.10.00004
ORF1ab/nsp2547T547IaCtaTt11AY.46.10.001027
ORF1ab/nsp2547T547IaCtaTt11AY.46.40.000165
ORF1ab/nsp2547T547IaCtaTt11AY.520.000814
ORF1ab/nsp2547T547IaCtaTt11AY.580.000907
ORF1ab/nsp2547T547IaCtaTt11AY.630.000387
ORF1ab/nsp2547T547IaCtaTt11AY.690.000187
ORF1ab/nsp2547T547IaCtaTt11AY.70.000196
ORF1ab/nsp2547T547IaCtaTt11AY.75.10.00018
ORF1ab/nsp2547T547IaCtaTt11AY.850.000427
ORF1ab/nsp2547T547IaCtaTt11AY.880.000884
ORF1ab/nsp2547T547IaCtaTt11AY.890.004902
ORF1ab/nsp2547T547IaCtaTt11AY.90.000068
ORF1ab/nsp2547T547IaCtaTt11AY.910.00073
ORF1ab/nsp2547T547IaCtaTt11AY.99.10.001553
ORF1ab/nsp2547T547IaCtaTt11AZ.10.000867
ORF1ab/nsp2547T547IaCtaTt11B.1.1.1530.001095
ORF1ab/nsp2547T547IaCtaTt11B.1.1.1570.000913
ORF1ab/nsp2547T547IaCtaTt11B.1.1.2040.00304
ORF1ab/nsp2547T547IaCtaTt11B.1.1.2160.00089
ORF1ab/nsp2547T547IaCtaTt11B.1.1.2200.001859
ORF1ab/nsp2547T547IaCtaTt11B.1.1.2630.001558
ORF1ab/nsp2547T547IaCtaTt11B.1.1.310.066667
ORF1ab/nsp2547T547IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp2547T547IaCtaTt11B.1.1.3430.020833
ORF1ab/nsp2547T547IaCtaTt11B.1.1.3690.000446
ORF1ab/nsp2547T547IaCtaTt11B.1.1.4170.002703
ORF1ab/nsp2547T547IaCtaTt11B.1.1.4190.007407
ORF1ab/nsp2547T547IaCtaTt11B.1.1.4330.001425
ORF1ab/nsp2547T547IaCtaTt11B.1.1.670.004566
ORF1ab/nsp2547T547IaCtaTt11B.1.1.830.00271
ORF1ab/nsp2547T547IaCtaTt11B.1.1110.001175
ORF1ab/nsp2547T547IaCtaTt11B.1.1700.00431
ORF1ab/nsp2547T547IaCtaTt11B.1.177.200.001517
ORF1ab/nsp2547T547IaCtaTt11B.1.177.40.000211
ORF1ab/nsp2547T547IaCtaTt11B.1.177.540.000606
ORF1ab/nsp2547T547IaCtaTt11B.1.177.600.000218
ORF1ab/nsp2547T547IaCtaTt11B.1.177.620.001192
ORF1ab/nsp2547T547IaCtaTt11B.1.177.720.00339
ORF1ab/nsp2547T547IaCtaTt11B.1.177.870.000728
ORF1ab/nsp2547T547IaCtaTt11B.1.177.90.001332
ORF1ab/nsp2547T547IaCtaTt11B.1.1990.004132
ORF1ab/nsp2547T547IaCtaTt11B.1.214.20.0006
ORF1ab/nsp2547T547IaCtaTt11B.1.2180.005155
ORF1ab/nsp2547T547IaCtaTt11B.1.2390.001221
ORF1ab/nsp2547T547IaCtaTt11B.1.2410.000812
ORF1ab/nsp2547T547IaCtaTt11B.1.258.200.015873
ORF1ab/nsp2547T547IaCtaTt11B.1.258.40.003448
ORF1ab/nsp2547T547IaCtaTt11B.1.2890.00266
ORF1ab/nsp2547T547IaCtaTt11B.1.3230.020833
ORF1ab/nsp2547T547IaCtaTt11B.1.3360.002439
ORF1ab/nsp2547T547IaCtaTt11B.1.351.50.0006
ORF1ab/nsp2547T547IaCtaTt11B.1.36.210.00216
ORF1ab/nsp2547T547IaCtaTt11B.1.3670.000792
ORF1ab/nsp2547T547IaCtaTt11B.1.3690.000285
ORF1ab/nsp2547T547IaCtaTt11B.1.4040.001302
ORF1ab/nsp2547T547IaCtaTt11B.1.4320.011236
ORF1ab/nsp2547T547IaCtaTt11B.1.4990.00105
ORF1ab/nsp2547T547IaCtaTt11B.1.5300.007143
ORF1ab/nsp2547T547IaCtaTt11B.1.5610.000397
ORF1ab/nsp2547T547IaCtaTt11B.1.5680.001111
ORF1ab/nsp2547T547IaCtaTt11B.1.5760.000907
ORF1ab/nsp2547T547IaCtaTt11B.1.5770.000687
ORF1ab/nsp2547T547IaCtaTt11B.1.5810.009434
ORF1ab/nsp2547T547IaCtaTt11B.1.5990.00365
ORF1ab/nsp2547T547IaCtaTt11B.1.6020.006536
ORF1ab/nsp2547T547IaCtaTt11B.1.9.40.006135
ORF1ab/nsp2547T547IaCtaTt11B.6.60.000889
ORF1ab/nsp2547T547IaCtaTt11C.20.016129
ORF1ab/nsp2547T547IaCtaTt11C.390.018868
ORF1ab/nsp2547T547IaCtaTt11M.20.083333
ORF1ab/nsp2547T547IaCtaTt11N.10.016949
ORF1ab/nsp2547T547IaCtaTt11N.50.001767
ORF1ab/nsp2547T547IaCtaTt11P.1.10.10.00813
ORF1ab/nsp2547T547IaCtaTt11P.1.110.010204
ORF1ab/nsp2547T547IaCtaTt11P.1.70.000319
ORF1ab/nsp2547T547IaCtaTt11P.40.003802
ORF1ab/nsp2547T547IaCtaTt11Q.10.000126
ORF1ab/nsp2547T547IaCtaTt11Q.30.000145
ORF1ab/nsp2547T547IaCtaTt11Q.40.000455
ORF1ab/nsp2547T547IaCtaTt11Q.70.001111
ORF1ab/nsp2547T547IaCtaTt11S.10.00495
ORF1ab/nsp2547T547IaCtaTt11Z.10.00289