CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T388del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2388T388del2T568del2delaCAa--320.6666671967-1969
ORF1ab/nsp2388T388del2T568del2delACa--a310.3333331967-1969

Details of the mutation T388del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2388T388del2aCAa--23All0
ORF1ab/nsp2388T388del2ACa--a13All0
ORF1ab/nsp2388T388del2aCAa--11AY.250.000006
ORF1ab/nsp2388T388del2ACa--a11B.1.1.70.000001
ORF1ab/nsp2388T388del2aCAa--11B.1.1.700.000341