CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T388T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2388T388TT568TsynacAacG88580.6590911967-1969
ORF1ab/nsp2388T388TT568TsynacAacC88210.2386361967-1969
ORF1ab/nsp2388T388TT568TsynacAacT8890.1022731967-1969

Details of the mutation T388T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2388T388TacAacG5888All0.000011
ORF1ab/nsp2388T388TacAacC2188All0.000004
ORF1ab/nsp2388T388TacAacT988All0.000002
ORF1ab/nsp2388T388TacAacC2030B.1.1.70.000018
ORF1ab/nsp2388T388TacAacG1030B.1.1.70.000009
ORF1ab/nsp2388T388TacAacG1718B.1.617.20.000064
ORF1ab/nsp2388T388TacAacT118B.1.617.20.000004
ORF1ab/nsp2388T388TacAacG77AY.40.000011
ORF1ab/nsp2388T388TacAacG44AY.1030.000025
ORF1ab/nsp2388T388TacAacG44AY.980.000316
ORF1ab/nsp2388T388TacAacG33B.10.000027
ORF1ab/nsp2388T388TacAacT23B.1.1770.000026
ORF1ab/nsp2388T388TacAacG13B.1.1770.000013
ORF1ab/nsp2388T388TacAacG22AY.330.000134
ORF1ab/nsp2388T388TacAacG12AY.430.000004
ORF1ab/nsp2388T388TacAacT12AY.430.000004
ORF1ab/nsp2388T388TacAacG11A.190.009434
ORF1ab/nsp2388T388TacAacG11A.270.001656
ORF1ab/nsp2388T388TacAacG11AY.1190.000035
ORF1ab/nsp2388T388TacAacT11AY.30.00001
ORF1ab/nsp2388T388TacAacT11AY.340.000097
ORF1ab/nsp2388T388TacAacG11AY.350.000233
ORF1ab/nsp2388T388TacAacG11AY.440.000006
ORF1ab/nsp2388T388TacAacG11AY.450.000122
ORF1ab/nsp2388T388TacAacG11AY.650.000533
ORF1ab/nsp2388T388TacAacG11B.1.1.5230.001563
ORF1ab/nsp2388T388TacAacT11B.1.2210.000071
ORF1ab/nsp2388T388TacAacT11B.1.2980.002114
ORF1ab/nsp2388T388TacAacG11B.1.36.220.001208
ORF1ab/nsp2388T388TacAacT11B.500.111111
ORF1ab/nsp2388T388TacAacC11Q.80.000165