CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T388I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2388T388IT568InonsynaCaaTa5706570611967-1969

Details of the mutation T388I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2388T388IaCaaTa57065706All0.001091
ORF1ab/nsp2388T388IaCaaTa11271127B.1.1.70.001009
ORF1ab/nsp2388T388IaCaaTa784784AY.600.73546
ORF1ab/nsp2388T388IaCaaTa329329AY.40.000512
ORF1ab/nsp2388T388IaCaaTa253253B.1.1.3690.112896
ORF1ab/nsp2388T388IaCaaTa251251B.1.4290.005906
ORF1ab/nsp2388T388IaCaaTa199199AY.250.001197
ORF1ab/nsp2388T388IaCaaTa150150B.1.617.20.000565
ORF1ab/nsp2388T388IaCaaTa149149B.1.1770.001962
ORF1ab/nsp2388T388IaCaaTa123123AY.1030.000764
ORF1ab/nsp2388T388IaCaaTa111111AY.30.001104
ORF1ab/nsp2388T388IaCaaTa109109B.1.20.00096
ORF1ab/nsp2388T388IaCaaTa8989AY.440.000542
ORF1ab/nsp2388T388IaCaaTa8787B.1.10.001578
ORF1ab/nsp2388T388IaCaaTa8787C.160.092259
ORF1ab/nsp2388T388IaCaaTa8585B.1.4270.004292
ORF1ab/nsp2388T388IaCaaTa8080B.1.1171
ORF1ab/nsp2388T388IaCaaTa7878B.10.000714
ORF1ab/nsp2388T388IaCaaTa7373AY.430.000323
ORF1ab/nsp2388T388IaCaaTa5959B.1.1.500.040054
ORF1ab/nsp2388T388IaCaaTa5959B.1.177.540.035779
ORF1ab/nsp2388T388IaCaaTa5959P.10.000929
ORF1ab/nsp2388T388IaCaaTa5353B.1.360.007733
ORF1ab/nsp2388T388IaCaaTa5252B.1.2430.003618
ORF1ab/nsp2388T388IaCaaTa4343B.1.258.170.004471
ORF1ab/nsp2388T388IaCaaTa4040AY.39.1.10.028986
ORF1ab/nsp2388T388IaCaaTa3737AY.1020.000981
ORF1ab/nsp2388T388IaCaaTa3737AY.290.000584
ORF1ab/nsp2388T388IaCaaTa3535AY.4.40.014321
ORF1ab/nsp2388T388IaCaaTa3434AY.9.20.001249
ORF1ab/nsp2388T388IaCaaTa3434B.1.1.5190.00135
ORF1ab/nsp2388T388IaCaaTa3434P.1.10.010801
ORF1ab/nsp2388T388IaCaaTa3030B.1.5260.000705
ORF1ab/nsp2388T388IaCaaTa2929AD.20.00635
ORF1ab/nsp2388T388IaCaaTa2626AY.840.011374
ORF1ab/nsp2388T388IaCaaTa2525AY.590.013242
ORF1ab/nsp2388T388IaCaaTa2424AY.540.002288
ORF1ab/nsp2388T388IaCaaTa2323B.1.3510.000684
ORF1ab/nsp2388T388IaCaaTa2121A.23.10.014789
ORF1ab/nsp2388T388IaCaaTa1919AY.750.001064
ORF1ab/nsp2388T388IaCaaTa1919B.1.1600.000593
ORF1ab/nsp2388T388IaCaaTa1919B.1.5250.00215
ORF1ab/nsp2388T388IaCaaTa1818AY.200.0007
ORF1ab/nsp2388T388IaCaaTa1818B.1.1.1760.007909
ORF1ab/nsp2388T388IaCaaTa1616B.1.177.820.007637
ORF1ab/nsp2388T388IaCaaTa1616P.1.140.000765
ORF1ab/nsp2388T388IaCaaTa1515AY.140.00132
ORF1ab/nsp2388T388IaCaaTa1515AY.390.000371
ORF1ab/nsp2388T388IaCaaTa1515AY.4.20.000325
ORF1ab/nsp2388T388IaCaaTa1515AY.470.000467
ORF1ab/nsp2388T388IaCaaTa1414B.1.1.700.004775
ORF1ab/nsp2388T388IaCaaTa1414B.1.6370.001023
ORF1ab/nsp2388T388IaCaaTa1313AY.50.000268
ORF1ab/nsp2388T388IaCaaTa1313AY.920.003735
ORF1ab/nsp2388T388IaCaaTa1313B.1.1.4340.004531
ORF1ab/nsp2388T388IaCaaTa1313B.1.5960.001133
ORF1ab/nsp2388T388IaCaaTa1313C.370.001509
ORF1ab/nsp2388T388IaCaaTa1212B.1.6210.001062
ORF1ab/nsp2388T388IaCaaTa1111AY.39.10.000436
ORF1ab/nsp2388T388IaCaaTa1111B.1.1.2740.055556
ORF1ab/nsp2388T388IaCaaTa1111B.1.177.730.006229
ORF1ab/nsp2388T388IaCaaTa1010AY.46.60.000722
ORF1ab/nsp2388T388IaCaaTa1010B.1.2210.00071
ORF1ab/nsp2388T388IaCaaTa99AY.116.10.002803
ORF1ab/nsp2388T388IaCaaTa99AY.1200.000335
ORF1ab/nsp2388T388IaCaaTa99B.1.177.530.021531
ORF1ab/nsp2388T388IaCaaTa88B.1.2180.041237
ORF1ab/nsp2388T388IaCaaTa88B.1.4410.076923
ORF1ab/nsp2388T388IaCaaTa88P.1.150.001859
ORF1ab/nsp2388T388IaCaaTa77AE.80.003423
ORF1ab/nsp2388T388IaCaaTa77AY.1000.000322
ORF1ab/nsp2388T388IaCaaTa77AY.270.000453
ORF1ab/nsp2388T388IaCaaTa77AY.330.000467
ORF1ab/nsp2388T388IaCaaTa77AY.980.000553
ORF1ab/nsp2388T388IaCaaTa77B.1.1.2220.001428
ORF1ab/nsp2388T388IaCaaTa77B.1.5750.002124
ORF1ab/nsp2388T388IaCaaTa66AY.3.10.000512
ORF1ab/nsp2388T388IaCaaTa66AY.90.000406
ORF1ab/nsp2388T388IaCaaTa66AY.900.004107
ORF1ab/nsp2388T388IaCaaTa66AY.930.001638
ORF1ab/nsp2388T388IaCaaTa66AY.99.20.000553
ORF1ab/nsp2388T388IaCaaTa66B.1.1.2140.000333
ORF1ab/nsp2388T388IaCaaTa66B.1.3690.001711
ORF1ab/nsp2388T388IaCaaTa66B.1.6180.024194
ORF1ab/nsp2388T388IaCaaTa66P.60.018868
ORF1ab/nsp2388T388IaCaaTa66Q.80.000989
ORF1ab/nsp2388T388IaCaaTa55AY.1170.000423
ORF1ab/nsp2388T388IaCaaTa55AY.1180.000313
ORF1ab/nsp2388T388IaCaaTa55AY.1210.000677
ORF1ab/nsp2388T388IaCaaTa55AY.450.000608
ORF1ab/nsp2388T388IaCaaTa55B.1.1.1590.023364
ORF1ab/nsp2388T388IaCaaTa55B.1.1.2940.006329
ORF1ab/nsp2388T388IaCaaTa55B.1.2340.00066
ORF1ab/nsp2388T388IaCaaTa55B.1.6340.017123
ORF1ab/nsp2388T388IaCaaTa44AY.1160.001147
ORF1ab/nsp2388T388IaCaaTa44AY.120.10.001284
ORF1ab/nsp2388T388IaCaaTa44AY.29.10.000882
ORF1ab/nsp2388T388IaCaaTa44B0.000511
ORF1ab/nsp2388T388IaCaaTa44B.1.1.3060.001754
ORF1ab/nsp2388T388IaCaaTa44B.1.5760.003626
ORF1ab/nsp2388T388IaCaaTa44R.10.00036
ORF1ab/nsp2388T388IaCaaTa33A.2.5.20.004717
ORF1ab/nsp2388T388IaCaaTa33AY.130.000483
ORF1ab/nsp2388T388IaCaaTa33AY.230.000209
ORF1ab/nsp2388T388IaCaaTa33AY.260.000085
ORF1ab/nsp2388T388IaCaaTa33AY.4.2.10.000447
ORF1ab/nsp2388T388IaCaaTa33AY.420.000121
ORF1ab/nsp2388T388IaCaaTa33AY.580.002722
ORF1ab/nsp2388T388IaCaaTa33AY.60.000123
ORF1ab/nsp2388T388IaCaaTa33AY.610.000314
ORF1ab/nsp2388T388IaCaaTa33AY.620.001307
ORF1ab/nsp2388T388IaCaaTa33AY.75.10.000541
ORF1ab/nsp2388T388IaCaaTa33AY.98.10.000145
ORF1ab/nsp2388T388IaCaaTa33B.1.1.1710.011029
ORF1ab/nsp2388T388IaCaaTa33B.1.1.3170.001235
ORF1ab/nsp2388T388IaCaaTa33B.1.177.330.004934
ORF1ab/nsp2388T388IaCaaTa33B.1.177.600.000655
ORF1ab/nsp2388T388IaCaaTa33B.1.2250.046154
ORF1ab/nsp2388T388IaCaaTa33B.1.36.170.001482
ORF1ab/nsp2388T388IaCaaTa33B.1.36.380.004926
ORF1ab/nsp2388T388IaCaaTa33B.1.4110.011111
ORF1ab/nsp2388T388IaCaaTa33B.1.4560.009804
ORF1ab/nsp2388T388IaCaaTa33B.1.4650.011407
ORF1ab/nsp2388T388IaCaaTa33B.1.4800.007463
ORF1ab/nsp2388T388IaCaaTa33B.1.6280.001057
ORF1ab/nsp2388T388IaCaaTa33D.20.000225
ORF1ab/nsp2388T388IaCaaTa33P.1.70.000958
ORF1ab/nsp2388T388IaCaaTa22A.10.000564
ORF1ab/nsp2388T388IaCaaTa22A.2.50.000998
ORF1ab/nsp2388T388IaCaaTa22AY.1140.000462
ORF1ab/nsp2388T388IaCaaTa22AY.1190.000071
ORF1ab/nsp2388T388IaCaaTa22AY.120.000632
ORF1ab/nsp2388T388IaCaaTa22AY.190.002281
ORF1ab/nsp2388T388IaCaaTa22AY.240.000862
ORF1ab/nsp2388T388IaCaaTa22AY.360.000296
ORF1ab/nsp2388T388IaCaaTa22AY.46.20.001271
ORF1ab/nsp2388T388IaCaaTa22AY.550.001835
ORF1ab/nsp2388T388IaCaaTa22AY.670.000929
ORF1ab/nsp2388T388IaCaaTa22AY.720.002721
ORF1ab/nsp2388T388IaCaaTa22AY.850.000854
ORF1ab/nsp2388T388IaCaaTa22AY.880.001768
ORF1ab/nsp2388T388IaCaaTa22B.1.1.1840.117647
ORF1ab/nsp2388T388IaCaaTa22B.1.1.2650.006309
ORF1ab/nsp2388T388IaCaaTa22B.1.1.2790.002242
ORF1ab/nsp2388T388IaCaaTa22B.1.1.3330.002153
ORF1ab/nsp2388T388IaCaaTa22B.1.177.620.002384
ORF1ab/nsp2388T388IaCaaTa22B.1.177.70.00033
ORF1ab/nsp2388T388IaCaaTa22B.1.177.810.000379
ORF1ab/nsp2388T388IaCaaTa22B.1.2580.000133
ORF1ab/nsp2388T388IaCaaTa22B.1.438.10.000215
ORF1ab/nsp2388T388IaCaaTa22B.1.4700.002809
ORF1ab/nsp2388T388IaCaaTa22B.1.619.10.001283
ORF1ab/nsp2388T388IaCaaTa22C.36.30.001134
ORF1ab/nsp2388T388IaCaaTa22Q.10.000253
ORF1ab/nsp2388T388IaCaaTa22Q.40.00091
ORF1ab/nsp2388T388IaCaaTa22Z.10.00578
ORF1ab/nsp2388T388IaCaaTa11A0.000387
ORF1ab/nsp2388T388IaCaaTa11A.190.009434
ORF1ab/nsp2388T388IaCaaTa11AE.10.011364
ORF1ab/nsp2388T388IaCaaTa11AM.40.003571
ORF1ab/nsp2388T388IaCaaTa11AT.10.005128
ORF1ab/nsp2388T388IaCaaTa11AY.1050.000643
ORF1ab/nsp2388T388IaCaaTa11AY.1060.000335
ORF1ab/nsp2388T388IaCaaTa11AY.110.001339
ORF1ab/nsp2388T388IaCaaTa11AY.1110.000183
ORF1ab/nsp2388T388IaCaaTa11AY.1130.000142
ORF1ab/nsp2388T388IaCaaTa11AY.280.00189
ORF1ab/nsp2388T388IaCaaTa11AY.300.000396
ORF1ab/nsp2388T388IaCaaTa11AY.340.000097
ORF1ab/nsp2388T388IaCaaTa11AY.4.50.000107
ORF1ab/nsp2388T388IaCaaTa11AY.410.000294
ORF1ab/nsp2388T388IaCaaTa11AY.46.10.001027
ORF1ab/nsp2388T388IaCaaTa11AY.5.30.000337
ORF1ab/nsp2388T388IaCaaTa11AY.680.000274
ORF1ab/nsp2388T388IaCaaTa11AY.7.10.000113
ORF1ab/nsp2388T388IaCaaTa11AY.710.000475
ORF1ab/nsp2388T388IaCaaTa11AY.740.000116
ORF1ab/nsp2388T388IaCaaTa11AY.820.001357
ORF1ab/nsp2388T388IaCaaTa11AY.9.10.000084
ORF1ab/nsp2388T388IaCaaTa11AY.99.10.001553
ORF1ab/nsp2388T388IaCaaTa11B.1.1.10.000327
ORF1ab/nsp2388T388IaCaaTa11B.1.1.1300.015385
ORF1ab/nsp2388T388IaCaaTa11B.1.1.1480.008772
ORF1ab/nsp2388T388IaCaaTa11B.1.1.1530.001095
ORF1ab/nsp2388T388IaCaaTa11B.1.1.1550.071429
ORF1ab/nsp2388T388IaCaaTa11B.1.1.1940.00495
ORF1ab/nsp2388T388IaCaaTa11B.1.1.2160.00089
ORF1ab/nsp2388T388IaCaaTa11B.1.1.250.000569
ORF1ab/nsp2388T388IaCaaTa11B.1.1.2820.011628
ORF1ab/nsp2388T388IaCaaTa11B.1.1.2910.000742
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3010.001179
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3180.000302
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3360.016667
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3480.000796
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3530.020833
ORF1ab/nsp2388T388IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp2388T388IaCaaTa11B.1.1.4130.006897
ORF1ab/nsp2388T388IaCaaTa11B.1.1.4160.000905
ORF1ab/nsp2388T388IaCaaTa11B.1.1.630.000386
ORF1ab/nsp2388T388IaCaaTa11B.1.1260.001276
ORF1ab/nsp2388T388IaCaaTa11B.1.130.002375
ORF1ab/nsp2388T388IaCaaTa11B.1.1420.002899
ORF1ab/nsp2388T388IaCaaTa11B.1.160.300.002976
ORF1ab/nsp2388T388IaCaaTa11B.1.1660.008475
ORF1ab/nsp2388T388IaCaaTa11B.1.177.210.000076
ORF1ab/nsp2388T388IaCaaTa11B.1.177.570.000281
ORF1ab/nsp2388T388IaCaaTa11B.1.177.60.000977
ORF1ab/nsp2388T388IaCaaTa11B.1.177.800.001912
ORF1ab/nsp2388T388IaCaaTa11B.1.2060.000816
ORF1ab/nsp2388T388IaCaaTa11B.1.221.10.002907
ORF1ab/nsp2388T388IaCaaTa11B.1.2320.000537
ORF1ab/nsp2388T388IaCaaTa11B.1.258.220.002667
ORF1ab/nsp2388T388IaCaaTa11B.1.3110.000275
ORF1ab/nsp2388T388IaCaaTa11B.1.3460.001311
ORF1ab/nsp2388T388IaCaaTa11B.1.351.20.000303
ORF1ab/nsp2388T388IaCaaTa11B.1.351.30.000876
ORF1ab/nsp2388T388IaCaaTa11B.1.3620.001541
ORF1ab/nsp2388T388IaCaaTa11B.1.3960.000706
ORF1ab/nsp2388T388IaCaaTa11B.1.4080.00369
ORF1ab/nsp2388T388IaCaaTa11B.1.416.10.001563
ORF1ab/nsp2388T388IaCaaTa11B.1.466.20.000391
ORF1ab/nsp2388T388IaCaaTa11B.1.4990.00105
ORF1ab/nsp2388T388IaCaaTa11B.1.5170.000427
ORF1ab/nsp2388T388IaCaaTa11B.1.5610.000397
ORF1ab/nsp2388T388IaCaaTa11B.1.595.10.005848
ORF1ab/nsp2388T388IaCaaTa11B.1.617.10.000129
ORF1ab/nsp2388T388IaCaaTa11B.1.617.30.002985
ORF1ab/nsp2388T388IaCaaTa11B.1.6200.000946
ORF1ab/nsp2388T388IaCaaTa11B.1.6230.000536
ORF1ab/nsp2388T388IaCaaTa11B.1.6250.002353
ORF1ab/nsp2388T388IaCaaTa11B.1.930.000934
ORF1ab/nsp2388T388IaCaaTa11C.10.002392
ORF1ab/nsp2388T388IaCaaTa11C.360.000911
ORF1ab/nsp2388T388IaCaaTa11C.40.01
ORF1ab/nsp2388T388IaCaaTa11K.10.02381
ORF1ab/nsp2388T388IaCaaTa11P.1.100.000269
ORF1ab/nsp2388T388IaCaaTa11P.1.170.000162