CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T310I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2310T310IT490InonsynaCtaTt9849810.9969511733-1735
ORF1ab/nsp2310T310IT490InonsynaCTaTA98420.002032521733-1735
ORF1ab/nsp2310T310IT490InonsynaCTaTC98410.001016261733-1735

Details of the mutation T310I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2310T310IaCtaTt981984All0.000188
ORF1ab/nsp2310T310IaCTaTA2984All0
ORF1ab/nsp2310T310IaCTaTC1984All0
ORF1ab/nsp2310T310IaCtaTt574574B.1.1.70.000514
ORF1ab/nsp2310T310IaCtaTt5151B.1.4871
ORF1ab/nsp2310T310IaCtaTt3535AY.740.004048
ORF1ab/nsp2310T310IaCtaTt3232AY.40.00005
ORF1ab/nsp2310T310IaCtaTt3030AY.430.000133
ORF1ab/nsp2310T310IaCtaTt2929B.1.2430.002018
ORF1ab/nsp2310T310IaCtaTt2121AY.30.000209
ORF1ab/nsp2310T310IaCtaTt1919P.1.140.000908
ORF1ab/nsp2310T310IaCtaTt1616AY.1030.000099
ORF1ab/nsp2310T310IaCtaTt1616B.10.000147
ORF1ab/nsp2310T310IaCtaTt1414B.1.20.000123
ORF1ab/nsp2310T310IaCtaTt1213B.1.617.20.000045
ORF1ab/nsp2310T310IaCTaTC113B.1.617.20.000004
ORF1ab/nsp2310T310IaCtaTt1010AY.540.000953
ORF1ab/nsp2310T310IaCtaTt1010B.1.2650.012706
ORF1ab/nsp2310T310IaCtaTt77AY.290.00011
ORF1ab/nsp2310T310IaCtaTt55AY.250.00003
ORF1ab/nsp2310T310IaCtaTt55B.1.10.000091
ORF1ab/nsp2310T310IaCtaTt55B.1.1770.000066
ORF1ab/nsp2310T310IaCtaTt55B.1.4220.004062
ORF1ab/nsp2310T310IaCtaTt55P.10.000079
ORF1ab/nsp2310T310IaCTaTA240.111111
ORF1ab/nsp2310T310IaCtaTt240.111111
ORF1ab/nsp2310T310IaCtaTt44AY.440.000024
ORF1ab/nsp2310T310IaCtaTt44AY.630.001547
ORF1ab/nsp2310T310IaCtaTt33AY.420.000121
ORF1ab/nsp2310T310IaCtaTt33AY.470.000093
ORF1ab/nsp2310T310IaCtaTt33AY.750.000168
ORF1ab/nsp2310T310IaCtaTt33B.1.1.4200.003018
ORF1ab/nsp2310T310IaCtaTt33B.30.002492
ORF1ab/nsp2310T310IaCtaTt22AY.260.000057
ORF1ab/nsp2310T310IaCtaTt22AY.270.000129
ORF1ab/nsp2310T310IaCtaTt22AY.370.000632
ORF1ab/nsp2310T310IaCtaTt22B.1.1.250.001137
ORF1ab/nsp2310T310IaCtaTt22B.1.2210.000142
ORF1ab/nsp2310T310IaCtaTt22B.1.5240.002813
ORF1ab/nsp2310T310IaCtaTt11A.10.000282
ORF1ab/nsp2310T310IaCtaTt11AE.80.000489
ORF1ab/nsp2310T310IaCtaTt11AU.20.002421
ORF1ab/nsp2310T310IaCtaTt11AY.1110.000183
ORF1ab/nsp2310T310IaCtaTt11AY.1160.000287
ORF1ab/nsp2310T310IaCtaTt11AY.1180.000063
ORF1ab/nsp2310T310IaCtaTt11AY.120.000316
ORF1ab/nsp2310T310IaCtaTt11AY.120.10.000321
ORF1ab/nsp2310T310IaCtaTt11AY.230.00007
ORF1ab/nsp2310T310IaCtaTt11AY.29.10.000221
ORF1ab/nsp2310T310IaCtaTt11AY.300.000396
ORF1ab/nsp2310T310IaCtaTt11AY.4.2.10.000149
ORF1ab/nsp2310T310IaCtaTt11AY.50.000021
ORF1ab/nsp2310T310IaCtaTt11AY.5.30.000337
ORF1ab/nsp2310T310IaCtaTt11AY.590.00053
ORF1ab/nsp2310T310IaCtaTt11AY.60.000041
ORF1ab/nsp2310T310IaCtaTt11AY.90.000068
ORF1ab/nsp2310T310IaCtaTt11AY.970.001701
ORF1ab/nsp2310T310IaCtaTt11B0.000128
ORF1ab/nsp2310T310IaCtaTt11B.1.1.1610.003534
ORF1ab/nsp2310T310IaCtaTt11B.1.1.1860.003436
ORF1ab/nsp2310T310IaCtaTt11B.1.1.5190.00004
ORF1ab/nsp2310T310IaCtaTt11B.1.177.210.000076
ORF1ab/nsp2310T310IaCtaTt11B.1.177.730.000566
ORF1ab/nsp2310T310IaCtaTt11B.1.2060.000816
ORF1ab/nsp2310T310IaCtaTt11B.1.2340.000132
ORF1ab/nsp2310T310IaCtaTt11B.1.3060.005714
ORF1ab/nsp2310T310IaCtaTt11B.1.3510.00003
ORF1ab/nsp2310T310IaCtaTt11B.1.3560.001727
ORF1ab/nsp2310T310IaCtaTt11B.1.360.000146
ORF1ab/nsp2310T310IaCtaTt11B.1.4530.003236
ORF1ab/nsp2310T310IaCtaTt11B.1.466.20.000391
ORF1ab/nsp2310T310IaCtaTt11B.1.5250.000113
ORF1ab/nsp2310T310IaCtaTt11B.1.5260.000024
ORF1ab/nsp2310T310IaCtaTt11B.1.5510.00129
ORF1ab/nsp2310T310IaCtaTt11B.1.5610.000397
ORF1ab/nsp2310T310IaCtaTt11B.1.5640.000426
ORF1ab/nsp2310T310IaCtaTt11B.1.621.10.000506
ORF1ab/nsp2310T310IaCtaTt11C.160.00106
ORF1ab/nsp2310T310IaCtaTt11C.370.000116
ORF1ab/nsp2310T310IaCtaTt11P.1.60.001946
ORF1ab/nsp2310T310IaCtaTt11Q.10.000126
ORF1ab/nsp2310T310IaCtaTt11Q.30.000145