CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T304A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2304T304AT484AnonsynAcaGca9869840.9979721715-1717
ORF1ab/nsp2304T304AT484AnonsynAcAGcC98620.00202841715-1717

Details of the mutation T304A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2304T304AAcaGca984986All0.000188
ORF1ab/nsp2304T304AAcAGcC2986All0
ORF1ab/nsp2304T304AAcaGca575575B.1.4040.748698
ORF1ab/nsp2304T304AAcaGca9292B.1.1600.002869
ORF1ab/nsp2304T304AAcaGca8585AY.40.000132
ORF1ab/nsp2304T304AAcaGca6868B.10.000623
ORF1ab/nsp2304T304AAcaGca2727B.1.1.4200.027163
ORF1ab/nsp2304T304AAcaGca2020B.1.1.70.000018
ORF1ab/nsp2304T304AAcaGca1111B.1.20.000097
ORF1ab/nsp2304T304AAcaGca77AY.390.000173
ORF1ab/nsp2304T304AAcaGca77AY.430.000031
ORF1ab/nsp2304T304AAcaGca77B.1.617.20.000026
ORF1ab/nsp2304T304AAcaGca66AY.1020.000159
ORF1ab/nsp2304T304AAcaGca66AY.200.000233
ORF1ab/nsp2304T304AAcaGca66AY.50.000124
ORF1ab/nsp2304T304AAcaGca55AY.30.00005
ORF1ab/nsp2304T304AAcAGcC240.111111
ORF1ab/nsp2304T304AAcaGca240.111111
ORF1ab/nsp2304T304AAcaGca44AY.670.001857
ORF1ab/nsp2304T304AAcaGca44B.1.10.000073
ORF1ab/nsp2304T304AAcaGca44B.1.5960.000349
ORF1ab/nsp2304T304AAcaGca33AY.250.000018
ORF1ab/nsp2304T304AAcaGca33B.1.2410.002435
ORF1ab/nsp2304T304AAcaGca33B.1.360.000438
ORF1ab/nsp2304T304AAcaGca33B.1.4290.000071
ORF1ab/nsp2304T304AAcaGca22AY.1210.000271
ORF1ab/nsp2304T304AAcaGca22AY.290.000032
ORF1ab/nsp2304T304AAcaGca22AY.420.00008
ORF1ab/nsp2304T304AAcaGca22AY.540.000191
ORF1ab/nsp2304T304AAcaGca22B.1.1460.008475
ORF1ab/nsp2304T304AAcaGca11AY.1030.000006
ORF1ab/nsp2304T304AAcaGca11AY.1170.000085
ORF1ab/nsp2304T304AAcaGca11AY.1180.000063
ORF1ab/nsp2304T304AAcaGca11AY.140.000088
ORF1ab/nsp2304T304AAcaGca11AY.230.00007
ORF1ab/nsp2304T304AAcaGca11AY.3.10.000085
ORF1ab/nsp2304T304AAcaGca11AY.4.10.000737
ORF1ab/nsp2304T304AAcaGca11AY.790.001211
ORF1ab/nsp2304T304AAcaGca11AY.980.000079
ORF1ab/nsp2304T304AAcaGca11B0.000128
ORF1ab/nsp2304T304AAcaGca11B.1.1.10.000327
ORF1ab/nsp2304T304AAcaGca11B.1.1.250.000569
ORF1ab/nsp2304T304AAcaGca11B.1.1.3070.002532
ORF1ab/nsp2304T304AAcaGca11B.1.177.210.000076
ORF1ab/nsp2304T304AAcaGca11B.1.1790.003759
ORF1ab/nsp2304T304AAcaGca11B.1.2340.000132
ORF1ab/nsp2304T304AAcaGca11B.1.2400.000216
ORF1ab/nsp2304T304AAcaGca11B.1.2430.00007
ORF1ab/nsp2304T304AAcaGca11B.1.3750.00082
ORF1ab/nsp2304T304AAcaGca11B.1.4270.00005
ORF1ab/nsp2304T304AAcaGca11B.1.4560.003268
ORF1ab/nsp2304T304AAcaGca11B.1.5610.000397
ORF1ab/nsp2304T304AAcaGca11B.1.5650.00081
ORF1ab/nsp2304T304AAcaGca11B.1.5820.000491
ORF1ab/nsp2304T304AAcaGca11B.1.810.021277
ORF1ab/nsp2304T304AAcaGca11C.370.000116