CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T256T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2256T256TT436TsynacAacG9286590.7101291571-1573
ORF1ab/nsp2256T256TT436TsynacAacC9282030.218751571-1573
ORF1ab/nsp2256T256TT436TsynacAacT928660.07112071571-1573

Details of the mutation T256T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2256T256TacAacG659928All0.000126
ORF1ab/nsp2256T256TacAacC203928All0.000039
ORF1ab/nsp2256T256TacAacT66928All0.000013
ORF1ab/nsp2256T256TacAacG229248B.1.1.70.000205
ORF1ab/nsp2256T256TacAacC10248B.1.1.70.000009
ORF1ab/nsp2256T256TacAacT9248B.1.1.70.000008
ORF1ab/nsp2256T256TacAacC101111B.1.10.001832
ORF1ab/nsp2256T256TacAacG6111B.1.10.000109
ORF1ab/nsp2256T256TacAacT4111B.1.10.000073
ORF1ab/nsp2256T256TacAacG5874P.10.000914
ORF1ab/nsp2256T256TacAacC1574P.10.000236
ORF1ab/nsp2256T256TacAacT174P.10.000016
ORF1ab/nsp2256T256TacAacG3442AY.430.000151
ORF1ab/nsp2256T256TacAacT442AY.430.000018
ORF1ab/nsp2256T256TacAacC442AY.430.000018
ORF1ab/nsp2256T256TacAacG2425AY.1030.000149
ORF1ab/nsp2256T256TacAacC125AY.1030.000006
ORF1ab/nsp2256T256TacAacG1725AY.40.000026
ORF1ab/nsp2256T256TacAacT425AY.40.000006
ORF1ab/nsp2256T256TacAacC425AY.40.000006
ORF1ab/nsp2256T256TacAacG1725B.1.617.20.000064
ORF1ab/nsp2256T256TacAacC525B.1.617.20.000019
ORF1ab/nsp2256T256TacAacT325B.1.617.20.000011
ORF1ab/nsp2256T256TacAacG1024B.10.000092
ORF1ab/nsp2256T256TacAacC1024B.10.000092
ORF1ab/nsp2256T256TacAacT424B.10.000037
ORF1ab/nsp2256T256TacAacG2121AY.98.10.001017
ORF1ab/nsp2256T256TacAacG2020AY.250.00012
ORF1ab/nsp2256T256TacAacG1620AY.440.000097
ORF1ab/nsp2256T256TacAacC320AY.440.000018
ORF1ab/nsp2256T256TacAacT120AY.440.000006
ORF1ab/nsp2256T256TacAacG1516B.1.1.2310.04644
ORF1ab/nsp2256T256TacAacC116B.1.1.2310.003096
ORF1ab/nsp2256T256TacAacG1414AY.140.001232
ORF1ab/nsp2256T256TacAacG1313AY.10.005144
ORF1ab/nsp2256T256TacAacG913AY.460.000937
ORF1ab/nsp2256T256TacAacC313AY.460.000312
ORF1ab/nsp2256T256TacAacT113AY.460.000104
ORF1ab/nsp2256T256TacAacG911AY.200.00035
ORF1ab/nsp2256T256TacAacC211AY.200.000078
ORF1ab/nsp2256T256TacAacG511B.1.20.000044
ORF1ab/nsp2256T256TacAacT311B.1.20.000026
ORF1ab/nsp2256T256TacAacC311B.1.20.000026
ORF1ab/nsp2256T256TacAacG79AY.50.000145
ORF1ab/nsp2256T256TacAacC29AY.50.000041
ORF1ab/nsp2256T256TacAacG88AY.5.40.002214
ORF1ab/nsp2256T256TacAacG68P.1.140.000287
ORF1ab/nsp2256T256TacAacT28P.1.140.000096
ORF1ab/nsp2256T256TacAacG67AY.30.00006
ORF1ab/nsp2256T256TacAacT17AY.30.00001
ORF1ab/nsp2256T256TacAacG77B.1.2340.000924
ORF1ab/nsp2256T256TacAacC57P.20.000933
ORF1ab/nsp2256T256TacAacT27P.20.000373
ORF1ab/nsp2256T256TacAacC360.166667
ORF1ab/nsp2256T256TacAacT260.111111
ORF1ab/nsp2256T256TacAacG160.055556
ORF1ab/nsp2256T256TacAacG66AY.390.000148
ORF1ab/nsp2256T256TacAacG56B.1.1770.000066
ORF1ab/nsp2256T256TacAacT16B.1.1770.000013
ORF1ab/nsp2256T256TacAacG45B.1.4270.000202
ORF1ab/nsp2256T256TacAacT15B.1.4270.00005
ORF1ab/nsp2256T256TacAacT45Q.30.00058
ORF1ab/nsp2256T256TacAacG15Q.30.000145
ORF1ab/nsp2256T256TacAacG34B.1.1.700.001023
ORF1ab/nsp2256T256TacAacT14B.1.1.700.000341
ORF1ab/nsp2256T256TacAacG34B.1.1600.000094
ORF1ab/nsp2256T256TacAacT14B.1.1600.000031
ORF1ab/nsp2256T256TacAacG34B.1.4290.000071
ORF1ab/nsp2256T256TacAacC14B.1.4290.000024
ORF1ab/nsp2256T256TacAacG23AY.1000.000092
ORF1ab/nsp2256T256TacAacT13AY.1000.000046
ORF1ab/nsp2256T256TacAacC23AY.1020.000053
ORF1ab/nsp2256T256TacAacG13AY.1020.000027
ORF1ab/nsp2256T256TacAacG33AY.1180.000188
ORF1ab/nsp2256T256TacAacG33AY.420.000121
ORF1ab/nsp2256T256TacAacG33AY.470.000093
ORF1ab/nsp2256T256TacAacC23B.1.1.330.000842
ORF1ab/nsp2256T256TacAacT13B.1.1.330.000421
ORF1ab/nsp2256T256TacAacG33B.1.1.5190.000119
ORF1ab/nsp2256T256TacAacG33B.1.258.170.000312
ORF1ab/nsp2256T256TacAacT23B.1.5260.000047
ORF1ab/nsp2256T256TacAacG13B.1.5260.000024
ORF1ab/nsp2256T256TacAacC33P.70.0131
ORF1ab/nsp2256T256TacAacG22AY.4.20.000043
ORF1ab/nsp2256T256TacAacC12AY.46.60.000072
ORF1ab/nsp2256T256TacAacT12AY.46.60.000072
ORF1ab/nsp2256T256TacAacG22AY.540.000191
ORF1ab/nsp2256T256TacAacC12AY.7.20.000559
ORF1ab/nsp2256T256TacAacG12AY.7.20.000559
ORF1ab/nsp2256T256TacAacC12AY.9.10.000084
ORF1ab/nsp2256T256TacAacG12AY.9.10.000084
ORF1ab/nsp2256T256TacAacC22AY.99.20.000184
ORF1ab/nsp2256T256TacAacC22B.1.1.1340.022727
ORF1ab/nsp2256T256TacAacC22B.1.1.280.000622
ORF1ab/nsp2256T256TacAacG22B.1.1.3060.000877
ORF1ab/nsp2256T256TacAacT22B.1.1.3160.00185
ORF1ab/nsp2256T256TacAacG22B.1.1.390.001019
ORF1ab/nsp2256T256TacAacG22B.1.2580.000133
ORF1ab/nsp2256T256TacAacT22B.1.3510.000059
ORF1ab/nsp2256T256TacAacG22B.1.6300.010471
ORF1ab/nsp2256T256TacAacG22B.1.6370.000146
ORF1ab/nsp2256T256TacAacG22C.36.30.001134
ORF1ab/nsp2256T256TacAacC11AY.1060.000335
ORF1ab/nsp2256T256TacAacC11AY.1070.000466
ORF1ab/nsp2256T256TacAacG11AY.1130.000142
ORF1ab/nsp2256T256TacAacG11AY.1170.000085
ORF1ab/nsp2256T256TacAacG11AY.1190.000035
ORF1ab/nsp2256T256TacAacC11AY.1200.000037
ORF1ab/nsp2256T256TacAacG11AY.130.000161
ORF1ab/nsp2256T256TacAacT11AY.230.00007
ORF1ab/nsp2256T256TacAacG11AY.260.000028
ORF1ab/nsp2256T256TacAacC11AY.330.000067
ORF1ab/nsp2256T256TacAacG11AY.360.000148
ORF1ab/nsp2256T256TacAacC11AY.4.2.10.000149
ORF1ab/nsp2256T256TacAacG11AY.410.000294
ORF1ab/nsp2256T256TacAacG11AY.450.000122
ORF1ab/nsp2256T256TacAacG11AY.46.20.000635
ORF1ab/nsp2256T256TacAacG11AY.480.000465
ORF1ab/nsp2256T256TacAacT11AY.5.30.000337
ORF1ab/nsp2256T256TacAacC11AY.580.000907
ORF1ab/nsp2256T256TacAacG11AY.590.00053
ORF1ab/nsp2256T256TacAacG11AY.610.000105
ORF1ab/nsp2256T256TacAacG11AY.620.000436
ORF1ab/nsp2256T256TacAacG11AY.670.000464
ORF1ab/nsp2256T256TacAacC11AY.700.000209
ORF1ab/nsp2256T256TacAacG11AY.750.000056
ORF1ab/nsp2256T256TacAacT11AY.820.001357
ORF1ab/nsp2256T256TacAacG11AY.840.000437
ORF1ab/nsp2256T256TacAacC11AY.90.000068
ORF1ab/nsp2256T256TacAacG11AY.920.000287
ORF1ab/nsp2256T256TacAacC11AY.970.001701
ORF1ab/nsp2256T256TacAacC11AY.99.10.001553
ORF1ab/nsp2256T256TacAacT11B0.000128
ORF1ab/nsp2256T256TacAacG11B.1.1.1860.003436
ORF1ab/nsp2256T256TacAacG11B.1.1.250.000569
ORF1ab/nsp2256T256TacAacG11B.1.1.2890.002083
ORF1ab/nsp2256T256TacAacG11B.1.1.3180.000302
ORF1ab/nsp2256T256TacAacC11B.1.1.3880.045455
ORF1ab/nsp2256T256TacAacG11B.1.1.4450.037037
ORF1ab/nsp2256T256TacAacG11B.1.1.630.000386
ORF1ab/nsp2256T256TacAacG11B.1.160.100.008065
ORF1ab/nsp2256T256TacAacT11B.1.160.260.002421
ORF1ab/nsp2256T256TacAacT11B.1.160.90.007194
ORF1ab/nsp2256T256TacAacG11B.1.177.430.001477
ORF1ab/nsp2256T256TacAacG11B.1.177.810.000189
ORF1ab/nsp2256T256TacAacG11B.1.2430.00007
ORF1ab/nsp2256T256TacAacT11B.1.3260.007576
ORF1ab/nsp2256T256TacAacG11B.1.351.20.000303
ORF1ab/nsp2256T256TacAacC11B.1.360.000146
ORF1ab/nsp2256T256TacAacG11B.1.36.290.000517
ORF1ab/nsp2256T256TacAacG11B.1.3610.001289
ORF1ab/nsp2256T256TacAacG11B.1.3960.000706
ORF1ab/nsp2256T256TacAacG11B.1.4260.001009
ORF1ab/nsp2256T256TacAacG11B.1.4620.007246
ORF1ab/nsp2256T256TacAacC11B.1.5250.000113
ORF1ab/nsp2256T256TacAacG11B.1.5610.000397
ORF1ab/nsp2256T256TacAacG11B.1.5900.004545
ORF1ab/nsp2256T256TacAacG11B.1.617.10.000129
ORF1ab/nsp2256T256TacAacG11B.1.6280.000352
ORF1ab/nsp2256T256TacAacG11B.60.00091
ORF1ab/nsp2256T256TacAacG11B.6.60.000889
ORF1ab/nsp2256T256TacAacG11C.370.000116
ORF1ab/nsp2256T256TacAacG11P.1.10.000318
ORF1ab/nsp2256T256TacAacT11P.1.150.000232
ORF1ab/nsp2256T256TacAacG11P.1.170.000162
ORF1ab/nsp2256T256TacAacC11P.1.20.001156
ORF1ab/nsp2256T256TacAacG11Q.80.000165
ORF1ab/nsp2256T256TacAacG11W.40.001351
ORF1ab/nsp2256T256TacAacG11Z.10.00289