CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T256A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2256T256AT436AnonsynAcaGca40390.9751571-1573
ORF1ab/nsp2256T256AT436AnonsynAcAGcT4010.0251571-1573

Details of the mutation T256A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2256T256AAcaGca3940All0.000007
ORF1ab/nsp2256T256AAcAGcT140All0
ORF1ab/nsp2256T256AAcaGca99B.1.1600.000281
ORF1ab/nsp2256T256AAcaGca77B.1.1.70.000006
ORF1ab/nsp2256T256AAcaGca33AY.4.20.000065
ORF1ab/nsp2256T256AAcaGca33B.1.1.4290.013825
ORF1ab/nsp2256T256AAcaGca22AY.1210.000271
ORF1ab/nsp2256T256AAcaGca22AY.40.000003
ORF1ab/nsp2256T256AAcaGca22P.10.000032
ORF1ab/nsp2256T256AAcaGca12P.20.000187
ORF1ab/nsp2256T256AAcAGcT12P.20.000187
ORF1ab/nsp2256T256AAcaGca11AY.160.00038
ORF1ab/nsp2256T256AAcaGca11AY.250.000006
ORF1ab/nsp2256T256AAcaGca11AY.30.00001
ORF1ab/nsp2256T256AAcaGca11AY.430.000004
ORF1ab/nsp2256T256AAcaGca11B.1.10.000018
ORF1ab/nsp2256T256AAcaGca11B.1.1770.000013
ORF1ab/nsp2256T256AAcaGca11B.1.177.110.001698
ORF1ab/nsp2256T256AAcaGca11B.1.2580.000067
ORF1ab/nsp2256T256AAcaGca11B.1.617.20.000004
ORF1ab/nsp2256T256AAcaGca11P.1.120.000484