CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T223del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2223T223del1T403del1delacTac-530.61472-1474
ORF1ab/nsp2223T223del1T403del1delaCTaT-510.21472-1474
ORF1ab/nsp2223T223del1T403del1delAct-ct510.21472-1474

Details of the mutation T223del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2223T223del1acTac-35All0.000001
ORF1ab/nsp2223T223del1aCTaT-15All0
ORF1ab/nsp2223T223del1Act-ct15All0
ORF1ab/nsp2223T223del1acTac-11AY.40.000002
ORF1ab/nsp2223T223del1Act-ct11B.10.000009
ORF1ab/nsp2223T223del1aCTaT-11B.1.1.70.000001
ORF1ab/nsp2223T223del1acTac-11B.1.177.440.000519
ORF1ab/nsp2223T223del1acTac-11B.1.3830.009009