CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T223del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2223T223delT403deldelACT---717111472-1474

Details of the mutation T223del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2223T223delACT---7171All0.000014
ORF1ab/nsp2223T223delACT---1313B.1.1.70.000012
ORF1ab/nsp2223T223delACT---1212B.1.4290.000282
ORF1ab/nsp2223T223delACT---440.222222
ORF1ab/nsp2223T223delACT---44B.1.1.330.001684
ORF1ab/nsp2223T223delACT---33AY.4.50.000322
ORF1ab/nsp2223T223delACT---33B.1.1.3480.002389
ORF1ab/nsp2223T223delACT---22AY.430.000009
ORF1ab/nsp2223T223delACT---22B.10.000018
ORF1ab/nsp2223T223delACT---22B.1.1.2840.000215
ORF1ab/nsp2223T223delACT---22B.1.1600.000062
ORF1ab/nsp2223T223delACT---22B.1.220.002635
ORF1ab/nsp2223T223delACT---22N.60.014184
ORF1ab/nsp2223T223delACT---22P.20.000373
ORF1ab/nsp2223T223delACT---11AY.1030.000006
ORF1ab/nsp2223T223delACT---11AY.1200.000037
ORF1ab/nsp2223T223delACT---11AY.190.00114
ORF1ab/nsp2223T223delACT---11AY.250.000006
ORF1ab/nsp2223T223delACT---11AY.290.000016
ORF1ab/nsp2223T223delACT---11AY.30.00001
ORF1ab/nsp2223T223delACT---11AY.40.000002
ORF1ab/nsp2223T223delACT---11AY.60.000041
ORF1ab/nsp2223T223delACT---11B.1.1.3150.008475
ORF1ab/nsp2223T223delACT---11B.1.1400.018868
ORF1ab/nsp2223T223delACT---11B.1.177.180.00116
ORF1ab/nsp2223T223delACT---11B.1.177.70.000165
ORF1ab/nsp2223T223delACT---11B.1.177.730.000566
ORF1ab/nsp2223T223delACT---11B.1.2420.018868
ORF1ab/nsp2223T223delACT---11B.1.4270.00005
ORF1ab/nsp2223T223delACT---11B.1.617.20.000004
ORF1ab/nsp2223T223delACT---11B.1.6210.000089
ORF1ab/nsp2223T223delACT---11Q.10.000126