CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T223I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2223T223IT403InonsynaCtaTt19040190380.9998951472-1474
ORF1ab/nsp2223T223IT403InonsynaCTaTC1904020.0001050421472-1474

Details of the mutation T223I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2223T223IaCtaTt1903819040All0.003641
ORF1ab/nsp2223T223IaCTaTC219040All0
ORF1ab/nsp2223T223IaCtaTt61176118B.1.617.20.023033
ORF1ab/nsp2223T223IaCTaTC16118B.1.617.20.000004
ORF1ab/nsp2223T223IaCtaTt47724772AY.1000.219544
ORF1ab/nsp2223T223IaCtaTt21982198AY.40.003421
ORF1ab/nsp2223T223IaCtaTt12661266B.1.1.70.001133
ORF1ab/nsp2223T223IaCtaTt10331033B.1.6200.977294
ORF1ab/nsp2223T223IaCtaTt274274AY.250.001648
ORF1ab/nsp2223T223IaCtaTt204204AY.1030.001267
ORF1ab/nsp2223T223IaCtaTt160160AY.430.000709
ORF1ab/nsp2223T223IaCtaTt152153B.1.20.001338
ORF1ab/nsp2223T223IaCTaTC1153B.1.20.000009
ORF1ab/nsp2223T223IaCtaTt143143AY.230.009974
ORF1ab/nsp2223T223IaCtaTt143143AY.440.00087
ORF1ab/nsp2223T223IaCtaTt128128B.10.001172
ORF1ab/nsp2223T223IaCtaTt107107AY.1020.002837
ORF1ab/nsp2223T223IaCtaTt8282AY.260.002321
ORF1ab/nsp2223T223IaCtaTt7373AY.1160.020935
ORF1ab/nsp2223T223IaCtaTt7171AY.390.001755
ORF1ab/nsp2223T223IaCtaTt7070B.1.1600.002183
ORF1ab/nsp2223T223IaCtaTt6767AY.840.029309
ORF1ab/nsp2223T223IaCtaTt6767B.1.10.001215
ORF1ab/nsp2223T223IaCtaTt6666P.10.00104
ORF1ab/nsp2223T223IaCtaTt6565AY.200.002526
ORF1ab/nsp2223T223IaCtaTt6464AY.30.000637
ORF1ab/nsp2223T223IaCtaTt5757B.1.1770.000751
ORF1ab/nsp2223T223IaCtaTt5454AY.1170.004564
ORF1ab/nsp2223T223IaCtaTt5353AY.300.020973
ORF1ab/nsp2223T223IaCtaTt5353B.1.258.170.005511
ORF1ab/nsp2223T223IaCtaTt5050B.1.4270.002525
ORF1ab/nsp2223T223IaCtaTt4848AY.980.003792
ORF1ab/nsp2223T223IaCtaTt4545B.1.1.3510.125698
ORF1ab/nsp2223T223IaCtaTt4141AY.1180.002569
ORF1ab/nsp2223T223IaCtaTt4141B.1.5960.003573
ORF1ab/nsp2223T223IaCtaTt3737B.1.3510.0011
ORF1ab/nsp2223T223IaCtaTt3535AY.1100.003944
ORF1ab/nsp2223T223IaCtaTt3434AY.1130.004841
ORF1ab/nsp2223T223IaCtaTt3232AY.1110.005861
ORF1ab/nsp2223T223IaCtaTt3131B.1.1.280.009648
ORF1ab/nsp2223T223IaCtaTt3131B.1.5340.3875
ORF1ab/nsp2223T223IaCtaTt3030AY.420.001207
ORF1ab/nsp2223T223IaCtaTt2929B.1.6010.878788
ORF1ab/nsp2223T223IaCtaTt2525AY.98.10.001211
ORF1ab/nsp2223T223IaCtaTt2424B.1.1470.018141
ORF1ab/nsp2223T223IaCtaTt2323B.1.2430.0016
ORF1ab/nsp2223T223IaCtaTt2121AY.450.002555
ORF1ab/nsp2223T223IaCtaTt2121B.1.2210.001492
ORF1ab/nsp2223T223IaCtaTt2020B.1.4290.000471
ORF1ab/nsp2223T223IaCtaTt1717AY.750.000952
ORF1ab/nsp2223T223IaCtaTt1717B.1.177.530.04067
ORF1ab/nsp2223T223IaCtaTt1616AY.1190.000565
ORF1ab/nsp2223T223IaCtaTt1616B.1.1.5190.000635
ORF1ab/nsp2223T223IaCtaTt1616B.1.6370.001169
ORF1ab/nsp2223T223IaCtaTt1515AY.360.002223
ORF1ab/nsp2223T223IaCtaTt1515AY.460.001561
ORF1ab/nsp2223T223IaCtaTt1515AY.5.30.005061
ORF1ab/nsp2223T223IaCtaTt1515AY.920.004309
ORF1ab/nsp2223T223IaCtaTt1515B.1.5250.001697
ORF1ab/nsp2223T223IaCtaTt1515P.1.170.002426
ORF1ab/nsp2223T223IaCtaTt1414AY.470.000435
ORF1ab/nsp2223T223IaCtaTt1414AY.670.0065
ORF1ab/nsp2223T223IaCtaTt1414B.1.1.3740.033254
ORF1ab/nsp2223T223IaCtaTt1313B.1.1.330.005471
ORF1ab/nsp2223T223IaCtaTt1313B.1.2580.000865
ORF1ab/nsp2223T223IaCtaTt1313B.1.438.10.001394
ORF1ab/nsp2223T223IaCtaTt1313P.1.10.00413
ORF1ab/nsp2223T223IaCtaTt1212AY.4.20.00026
ORF1ab/nsp2223T223IaCtaTt1212AY.50.000248
ORF1ab/nsp2223T223IaCtaTt1111AY.1010.005395
ORF1ab/nsp2223T223IaCtaTt1111AY.80.006667
ORF1ab/nsp2223T223IaCtaTt1111B0.001406
ORF1ab/nsp2223T223IaCtaTt1010AY.330.000668
ORF1ab/nsp2223T223IaCtaTt1010AY.780.015408
ORF1ab/nsp2223T223IaCtaTt1010B.1.1.3060.004384
ORF1ab/nsp2223T223IaCtaTt1010B.1.1.3480.007962
ORF1ab/nsp2223T223IaCtaTt99B.1.1.250.005117
ORF1ab/nsp2223T223IaCtaTt99B.1.30.02356
ORF1ab/nsp2223T223IaCtaTt88AY.140.000704
ORF1ab/nsp2223T223IaCtaTt88AY.190.009122
ORF1ab/nsp2223T223IaCtaTt88AY.340.000776
ORF1ab/nsp2223T223IaCtaTt88AY.350.001864
ORF1ab/nsp2223T223IaCtaTt88AY.60.000329
ORF1ab/nsp2223T223IaCtaTt88AY.75.10.001442
ORF1ab/nsp2223T223IaCtaTt88B.1.1.2140.000444
ORF1ab/nsp2223T223IaCtaTt88B.1.177.860.001468
ORF1ab/nsp2223T223IaCtaTt88B.1.360.001167
ORF1ab/nsp2223T223IaCtaTt88B.1.5210.039801
ORF1ab/nsp2223T223IaCtaTt88B.1.5260.000188
ORF1ab/nsp2223T223IaCtaTt77AY.1040.013889
ORF1ab/nsp2223T223IaCtaTt77AY.1050.004502
ORF1ab/nsp2223T223IaCtaTt77B.1.3890.007014
ORF1ab/nsp2223T223IaCtaTt66AY.46.40.000987
ORF1ab/nsp2223T223IaCtaTt66AY.830.010345
ORF1ab/nsp2223T223IaCtaTt66B.1.1.2840.000644
ORF1ab/nsp2223T223IaCtaTt66B.1.1.500.004073
ORF1ab/nsp2223T223IaCtaTt66B.1.1.630.002315
ORF1ab/nsp2223T223IaCtaTt66B.1.4090.004687
ORF1ab/nsp2223T223IaCtaTt66B.1.5620.111111
ORF1ab/nsp2223T223IaCtaTt55AY.240.002155
ORF1ab/nsp2223T223IaCtaTt55AY.270.000324
ORF1ab/nsp2223T223IaCtaTt55AY.4.40.002046
ORF1ab/nsp2223T223IaCtaTt55AY.46.60.000361
ORF1ab/nsp2223T223IaCtaTt55AY.9.20.000184
ORF1ab/nsp2223T223IaCtaTt55AY.910.003652
ORF1ab/nsp2223T223IaCtaTt55B.1.1.1960.028571
ORF1ab/nsp2223T223IaCtaTt55B.1.214.20.002998
ORF1ab/nsp2223T223IaCtaTt55B.1.4710.013661
ORF1ab/nsp2223T223IaCtaTt55B.1.617.10.000645
ORF1ab/nsp2223T223IaCtaTt55P.1.120.00242
ORF1ab/nsp2223T223IaCtaTt44AY.290.000063
ORF1ab/nsp2223T223IaCtaTt44AY.39.10.000158
ORF1ab/nsp2223T223IaCtaTt44AY.480.00186
ORF1ab/nsp2223T223IaCtaTt44AY.620.001743
ORF1ab/nsp2223T223IaCtaTt44AY.860.00332
ORF1ab/nsp2223T223IaCtaTt44AY.990.004197
ORF1ab/nsp2223T223IaCtaTt44B.1.1.3110.001433
ORF1ab/nsp2223T223IaCtaTt44B.1.1.3180.001207
ORF1ab/nsp2223T223IaCtaTt44B.1.177.440.002076
ORF1ab/nsp2223T223IaCtaTt44B.1.36.170.001976
ORF1ab/nsp2223T223IaCtaTt44B.1.36.180.001681
ORF1ab/nsp2223T223IaCtaTt44B.1.5580.018265
ORF1ab/nsp2223T223IaCtaTt44R.10.00036
ORF1ab/nsp2223T223IaCtaTt33AY.1200.000112
ORF1ab/nsp2223T223IaCtaTt33AY.1210.000406
ORF1ab/nsp2223T223IaCtaTt33AY.320.001597
ORF1ab/nsp2223T223IaCtaTt33AY.46.20.001906
ORF1ab/nsp2223T223IaCtaTt33AY.540.000286
ORF1ab/nsp2223T223IaCtaTt33AY.610.000314
ORF1ab/nsp2223T223IaCtaTt33AY.810.005976
ORF1ab/nsp2223T223IaCtaTt33AY.880.002653
ORF1ab/nsp2223T223IaCtaTt33AY.99.20.000276
ORF1ab/nsp2223T223IaCtaTt33B.1.1.1010.03
ORF1ab/nsp2223T223IaCtaTt33B.1.1.1530.003286
ORF1ab/nsp2223T223IaCtaTt33B.1.1.4160.002715
ORF1ab/nsp2223T223IaCtaTt33B.1.177.810.000568
ORF1ab/nsp2223T223IaCtaTt33B.1.177.820.001432
ORF1ab/nsp2223T223IaCtaTt33B.1.36.380.004926
ORF1ab/nsp2223T223IaCtaTt33B.1.5090.002597
ORF1ab/nsp2223T223IaCtaTt33B.1.5640.001278
ORF1ab/nsp2223T223IaCtaTt22A.190.018868
ORF1ab/nsp2223T223IaCtaTt22A.2.50.000998
ORF1ab/nsp2223T223IaCtaTt22AY.1080.002205
ORF1ab/nsp2223T223IaCtaTt22AY.130.000322
ORF1ab/nsp2223T223IaCtaTt22AY.160.000759
ORF1ab/nsp2223T223IaCtaTt22AY.16.10.00094
ORF1ab/nsp2223T223IaCtaTt22AY.20.000712
ORF1ab/nsp2223T223IaCtaTt22AY.210.003795
ORF1ab/nsp2223T223IaCtaTt22AY.4.50.000215
ORF1ab/nsp2223T223IaCtaTt22AY.410.000588
ORF1ab/nsp2223T223IaCtaTt22AY.550.001835
ORF1ab/nsp2223T223IaCtaTt22AY.570.001312
ORF1ab/nsp2223T223IaCtaTt22AY.70.000392
ORF1ab/nsp2223T223IaCtaTt22AY.7.10.000225
ORF1ab/nsp2223T223IaCtaTt22AY.700.000417
ORF1ab/nsp2223T223IaCtaTt22AY.800.002257
ORF1ab/nsp2223T223IaCtaTt22AY.820.002714
ORF1ab/nsp2223T223IaCtaTt22AY.850.000854
ORF1ab/nsp2223T223IaCtaTt22AY.870.001665
ORF1ab/nsp2223T223IaCtaTt22AZ.10.001735
ORF1ab/nsp2223T223IaCtaTt22AZ.20.001642
ORF1ab/nsp2223T223IaCtaTt22B.1.1.100.00223
ORF1ab/nsp2223T223IaCtaTt22B.1.1.1570.001826
ORF1ab/nsp2223T223IaCtaTt22B.1.1.2160.001781
ORF1ab/nsp2223T223IaCtaTt22B.1.1.3120.003824
ORF1ab/nsp2223T223IaCtaTt22B.1.1.390.001019
ORF1ab/nsp2223T223IaCtaTt22B.1.1.4340.000697
ORF1ab/nsp2223T223IaCtaTt22B.1.1.4620.017241
ORF1ab/nsp2223T223IaCtaTt22B.1.1270.004396
ORF1ab/nsp2223T223IaCtaTt22B.1.177.260.013986
ORF1ab/nsp2223T223IaCtaTt22B.1.221.30.001667
ORF1ab/nsp2223T223IaCtaTt22B.1.2290.019417
ORF1ab/nsp2223T223IaCtaTt22B.1.2400.000431
ORF1ab/nsp2223T223IaCtaTt22B.1.36.290.001035
ORF1ab/nsp2223T223IaCtaTt22B.1.36.70.008
ORF1ab/nsp2223T223IaCtaTt22B.1.36.80.002
ORF1ab/nsp2223T223IaCtaTt22B.1.4740.003802
ORF1ab/nsp2223T223IaCtaTt22B.1.5380.016129
ORF1ab/nsp2223T223IaCtaTt22B.1.5650.001621
ORF1ab/nsp2223T223IaCtaTt22B.1.5750.000607
ORF1ab/nsp2223T223IaCtaTt22B.1.6090.000959
ORF1ab/nsp2223T223IaCtaTt22B.1.6210.000177
ORF1ab/nsp2223T223IaCtaTt22D.20.00015
ORF1ab/nsp2223T223IaCtaTt22P.1.140.000096
ORF1ab/nsp2223T223IaCtaTt22P.1.150.000465
ORF1ab/nsp2223T223IaCtaTt22P.1.160.000748
ORF1ab/nsp2223T223IaCtaTt22P.1.20.002312
ORF1ab/nsp2223T223IaCtaTt22P.1.70.000639
ORF1ab/nsp2223T223IaCtaTt22Q.30.00029
ORF1ab/nsp2223T223IaCtaTt22Q.80.00033
ORF1ab/nsp2223T223IaCtaTt11AY.10.000396
ORF1ab/nsp2223T223IaCtaTt11AY.1070.000466
ORF1ab/nsp2223T223IaCtaTt11AY.1140.000231
ORF1ab/nsp2223T223IaCtaTt11AY.3.10.000085
ORF1ab/nsp2223T223IaCtaTt11AY.370.000316
ORF1ab/nsp2223T223IaCtaTt11AY.380.000499
ORF1ab/nsp2223T223IaCtaTt11AY.39.20.001541
ORF1ab/nsp2223T223IaCtaTt11AY.4.30.000842
ORF1ab/nsp2223T223IaCtaTt11AY.46.10.001027
ORF1ab/nsp2223T223IaCtaTt11AY.46.30.000934
ORF1ab/nsp2223T223IaCtaTt11AY.46.50.000198
ORF1ab/nsp2223T223IaCtaTt11AY.500.000799
ORF1ab/nsp2223T223IaCtaTt11AY.510.000909
ORF1ab/nsp2223T223IaCtaTt11AY.530.000288
ORF1ab/nsp2223T223IaCtaTt11AY.650.000533
ORF1ab/nsp2223T223IaCtaTt11AY.660.00107
ORF1ab/nsp2223T223IaCtaTt11AY.720.001361
ORF1ab/nsp2223T223IaCtaTt11AY.730.000665
ORF1ab/nsp2223T223IaCtaTt11AY.770.001127
ORF1ab/nsp2223T223IaCtaTt11AY.790.001211
ORF1ab/nsp2223T223IaCtaTt11AY.90.000068
ORF1ab/nsp2223T223IaCtaTt11AY.900.000684
ORF1ab/nsp2223T223IaCtaTt11B.1.1.1440.028571
ORF1ab/nsp2223T223IaCtaTt11B.1.1.1610.003534
ORF1ab/nsp2223T223IaCtaTt11B.1.1.1700.001247
ORF1ab/nsp2223T223IaCtaTt11B.1.1.1740.003378
ORF1ab/nsp2223T223IaCtaTt11B.1.1.1920.002309
ORF1ab/nsp2223T223IaCtaTt11B.1.1.2040.00304
ORF1ab/nsp2223T223IaCtaTt11B.1.1.2170.003636
ORF1ab/nsp2223T223IaCtaTt11B.1.1.2220.000204
ORF1ab/nsp2223T223IaCtaTt11B.1.1.2410.00207
ORF1ab/nsp2223T223IaCtaTt11B.1.1.2940.001266
ORF1ab/nsp2223T223IaCtaTt11B.1.1.3070.002532
ORF1ab/nsp2223T223IaCtaTt11B.1.1.3170.000412
ORF1ab/nsp2223T223IaCtaTt11B.1.1.3280.016949
ORF1ab/nsp2223T223IaCtaTt11B.1.1.3650.005587
ORF1ab/nsp2223T223IaCtaTt11B.1.1.370.000193
ORF1ab/nsp2223T223IaCtaTt11B.1.1.3870.058824
ORF1ab/nsp2223T223IaCtaTt11B.1.1.5230.001563
ORF1ab/nsp2223T223IaCtaTt11B.1.1110.001175
ORF1ab/nsp2223T223IaCtaTt11B.1.1460.004237
ORF1ab/nsp2223T223IaCtaTt11B.1.160.290.004219
ORF1ab/nsp2223T223IaCtaTt11B.1.177.320.00135
ORF1ab/nsp2223T223IaCtaTt11B.1.177.370.027027
ORF1ab/nsp2223T223IaCtaTt11B.1.177.460.000918
ORF1ab/nsp2223T223IaCtaTt11B.1.177.730.000566
ORF1ab/nsp2223T223IaCtaTt11B.1.2010.005682
ORF1ab/nsp2223T223IaCtaTt11B.1.2320.000537
ORF1ab/nsp2223T223IaCtaTt11B.1.258.150.018868
ORF1ab/nsp2223T223IaCtaTt11B.1.258.40.003448
ORF1ab/nsp2223T223IaCtaTt11B.1.2980.002114
ORF1ab/nsp2223T223IaCtaTt11B.1.3020.013333
ORF1ab/nsp2223T223IaCtaTt11B.1.351.20.000303
ORF1ab/nsp2223T223IaCtaTt11B.1.3690.000285
ORF1ab/nsp2223T223IaCtaTt11B.1.370.014706
ORF1ab/nsp2223T223IaCtaTt11B.1.3710.001122
ORF1ab/nsp2223T223IaCtaTt11B.1.3810.007812
ORF1ab/nsp2223T223IaCtaTt11B.1.4000.000429
ORF1ab/nsp2223T223IaCtaTt11B.1.4030.003268
ORF1ab/nsp2223T223IaCtaTt11B.1.4200.010417
ORF1ab/nsp2223T223IaCtaTt11B.1.4250.002994
ORF1ab/nsp2223T223IaCtaTt11B.1.4410.009615
ORF1ab/nsp2223T223IaCtaTt11B.1.4530.003236
ORF1ab/nsp2223T223IaCtaTt11B.1.4560.003268
ORF1ab/nsp2223T223IaCtaTt11B.1.4650.003802
ORF1ab/nsp2223T223IaCtaTt11B.1.466.20.000391
ORF1ab/nsp2223T223IaCtaTt11B.1.4700.001404
ORF1ab/nsp2223T223IaCtaTt11B.1.5410.004425
ORF1ab/nsp2223T223IaCtaTt11B.1.5700.002941
ORF1ab/nsp2223T223IaCtaTt11B.1.5760.000907
ORF1ab/nsp2223T223IaCtaTt11B.1.5770.000687
ORF1ab/nsp2223T223IaCtaTt11B.1.5860.010989
ORF1ab/nsp2223T223IaCtaTt11B.1.6120.002653
ORF1ab/nsp2223T223IaCtaTt11B.1.619.10.000641
ORF1ab/nsp2223T223IaCtaTt11B.1.6230.000536
ORF1ab/nsp2223T223IaCtaTt11B.1.6250.002353
ORF1ab/nsp2223T223IaCtaTt11B.1.6270.00202
ORF1ab/nsp2223T223IaCtaTt11B.1.6280.000352
ORF1ab/nsp2223T223IaCtaTt11B.1.780.008547
ORF1ab/nsp2223T223IaCtaTt11B.230.002924
ORF1ab/nsp2223T223IaCtaTt11B.40.002208
ORF1ab/nsp2223T223IaCtaTt11C.1.20.004255
ORF1ab/nsp2223T223IaCtaTt11C.140.004329
ORF1ab/nsp2223T223IaCtaTt11C.36.30.000567
ORF1ab/nsp2223T223IaCtaTt11L.30.003546
ORF1ab/nsp2223T223IaCtaTt11P.1.40.000977
ORF1ab/nsp2223T223IaCtaTt11P.20.000187
ORF1ab/nsp2223T223IaCtaTt11P.30.001595
ORF1ab/nsp2223T223IaCtaTt11P.60.003145
ORF1ab/nsp2223T223IaCtaTt11Q.10.000126
ORF1ab/nsp2223T223IaCtaTt11Q.40.000455