CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = T166N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2166T166NT346NnonsynaCtaAt2692680.9962831301-1303
ORF1ab/nsp2166T166NT346NnonsynaCTaAC26910.003717471301-1303

Details of the mutation T166N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2166T166NaCtaAt268269All0.000051
ORF1ab/nsp2166T166NaCTaAC1269All0
ORF1ab/nsp2166T166NaCtaAt7878AY.260.002208
ORF1ab/nsp2166T166NaCtaAt6060B.1.617.20.000226
ORF1ab/nsp2166T166NaCtaAt2525B.1.20.00022
ORF1ab/nsp2166T166NaCtaAt2424AY.40.000037
ORF1ab/nsp2166T166NaCtaAt2021B.1.1.70.000018
ORF1ab/nsp2166T166NaCTaAC121B.1.1.70.000001
ORF1ab/nsp2166T166NaCtaAt55AY.460.00052
ORF1ab/nsp2166T166NaCtaAt55C.360.004554
ORF1ab/nsp2166T166NaCtaAt44AY.430.000018
ORF1ab/nsp2166T166NaCtaAt44B.1.5610.001588
ORF1ab/nsp2166T166NaCtaAt33AY.1130.000427
ORF1ab/nsp2166T166NaCtaAt33AY.200.000117
ORF1ab/nsp2166T166NaCtaAt33B.1.4290.000071
ORF1ab/nsp2166T166NaCtaAt33P.1.170.000485
ORF1ab/nsp2166T166NaCtaAt22AY.1020.000053
ORF1ab/nsp2166T166NaCtaAt22AY.1030.000012
ORF1ab/nsp2166T166NaCtaAt22AY.420.00008
ORF1ab/nsp2166T166NaCtaAt22AY.440.000012
ORF1ab/nsp2166T166NaCtaAt22AY.70.000392
ORF1ab/nsp2166T166NaCtaAt22B.10.000018
ORF1ab/nsp2166T166NaCtaAt22B.1.10.000036
ORF1ab/nsp2166T166NaCtaAt22B.1.1600.000062
ORF1ab/nsp2166T166NaCtaAt22B.1.177.600.000437
ORF1ab/nsp2166T166NaCtaAt11AY.1000.000046
ORF1ab/nsp2166T166NaCtaAt11AY.1080.001103
ORF1ab/nsp2166T166NaCtaAt11AY.300.000396
ORF1ab/nsp2166T166NaCtaAt11AY.390.000025
ORF1ab/nsp2166T166NaCtaAt11AY.450.000122
ORF1ab/nsp2166T166NaCtaAt11AY.99.20.000092
ORF1ab/nsp2166T166NaCtaAt11B0.000128
ORF1ab/nsp2166T166NaCtaAt11B.1.177.730.000566
ORF1ab/nsp2166T166NaCtaAt11B.1.3490.000715
ORF1ab/nsp2166T166NaCtaAt11B.1.36.290.000517
ORF1ab/nsp2166T166NaCtaAt11B.1.5250.000113
ORF1ab/nsp2166T166NaCtaAt11B.1.6210.000089
ORF1ab/nsp2166T166NaCtaAt11C.36.10.004149