CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 166 | T166I | T346I | nonsyn | aCt | aTt | 5099 | 5098 | 0.999804 | 1301-1303 |
ORF1ab/nsp2 | 166 | T166I | T346I | nonsyn | aCT | aTA | 5099 | 1 | 0.000196117 | 1301-1303 |
Details of the mutation T166I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5098 | 5099 | All | 0.000975 |
ORF1ab/nsp2 | 166 | T166I | aCT | aTA | 1 | 5099 | All | 0 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1374 | 1374 | B.1.1.7 | 0.00123 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 974 | 974 | B.1.428 | 0.993878 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 233 | 233 | B.1.411 | 0.862963 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 215 | 215 | AY.4 | 0.000335 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 213 | 213 | B.1 | 0.001951 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 140 | 140 | AY.33 | 0.009349 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 109 | 109 | AY.103 | 0.000677 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 94 | 94 | B.1.617.2 | 0.000354 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 78 | 78 | B.1.428.3 | 1 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 76 | 76 | AY.44 | 0.000463 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 75 | 75 | B.1.525 | 0.008487 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 75 | 75 | B.1.595 | 0.019572 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 74 | 74 | AY.25 | 0.000445 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 74 | 74 | B.1.429 | 0.001741 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 72 | 72 | B.1.311 | 0.019769 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 68 | 68 | B.1.517 | 0.029035 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 58 | 58 | P.1 | 0.000914 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 55 | 55 | AY.43 | 0.000244 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 49 | 49 | B.1.2 | 0.000431 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 39 | 39 | B.1.427 | 0.001969 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 37 | 37 | B.1.613 | 1 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 34 | 34 | B.1.177 | 0.000448 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 33 | 33 | AY.3 | 0.000328 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 30 | 30 | B.1.428.2 | 1 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 29 | 29 | B.1.1 | 0.000526 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 29 | 29 | B.1.428.1 | 1 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 28 | 28 | B.1.526 | 0.000658 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 24 | 24 | AY.61 | 0.002515 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 23 | 23 | R.1 | 0.00207 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 22 | 22 | B.1.177.18 | 0.025522 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 21 | 21 | B.1.243 | 0.001461 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 20 | 20 | AY.93 | 0.005461 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 20 | 20 | B.1.358 | 1 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 18 | 18 | AY.100 | 0.000828 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 18 | 18 | B.1.1.39 | 0.009174 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 17 | 17 | AY.34 | 0.001648 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 16 | 16 | AY.102 | 0.000424 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 16 | 16 | B.1.221 | 0.001137 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 16 | 16 | B.1.36.18 | 0.006723 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 15 | 15 | B | 0.001917 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 14 | 14 | AY.29 | 0.000221 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 14 | 14 | AY.74 | 0.001619 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 14 | 14 | B.1.1.519 | 0.000556 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 14 | 14 | B.1.160 | 0.000437 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 13 | 13 | AY.66 | 0.013904 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 12 | 12 | AY.118 | 0.000752 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 11 | 11 | B.1.229 | 0.106796 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 11 | 11 | P.1.14 | 0.000526 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 10 | 10 | AY.9.2 | 0.000367 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 10 | 10 | B.1.258 | 0.000665 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 9 | 9 | AY.119 | 0.000318 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 9 | 9 | AY.20 | 0.00035 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 8 | 8 | AY.120 | 0.000297 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 8 | 8 | AY.47 | 0.000249 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 8 | 8 | AY.75 | 0.000448 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 8 | 8 | P.1.10 | 0.002156 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 7 | 7 | AY.26 | 0.000198 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 7 | 7 | AY.59 | 0.003708 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 6 | 6 | AY.117 | 0.000507 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 6 | 6 | AY.45 | 0.00073 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 6 | 6 | B.1.1.148 | 0.052632 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 6 | 6 | B.1.160.26 | 0.014528 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | AY.109 | 0.003698 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | AY.30 | 0.001979 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | AY.4.5 | 0.000537 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | AY.46 | 0.00052 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | B.1.1.37 | 0.000964 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | B.1.258.17 | 0.00052 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | P.2 | 0.000933 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 5 | 5 | Q.6 | 0.033113 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | B.1.1.434 | 0.001394 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | B.1.177.21 | 0.000306 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | B.1.241 | 0.003247 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | B.1.36.29 | 0.002069 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | B.1.637 | 0.000292 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 4 | 4 | C.30 | 0.006908 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | AY.3.1 | 0.000256 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | AY.6 | 0.000123 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | AY.99.2 | 0.000276 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.1.219 | 0.015 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.157 | 0.008955 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.177.40 | 0.015464 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.234 | 0.000396 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.236 | 0.00616 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.350 | 0.008798 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.36 | 0.000438 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 3 | B.1.36.8 | 0.002 |
ORF1ab/nsp2 | 166 | T166I | aCT | aTA | 1 | 3 | B.1.36.8 | 0.001 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.408 | 0.01107 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | B.1.577 | 0.002062 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 3 | 3 | P.1.15 | 0.000697 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.46.2 | 0.001271 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.46.4 | 0.000329 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | AY.94 | 0.000885 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.1.157 | 0.001826 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.1.161 | 0.007067 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.1.413 | 0.013793 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.177.86 | 0.000367 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.349 | 0.00143 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.351 | 0.000059 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.36.10 | 0.009569 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | B.1.551 | 0.002581 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | P.1.7 | 0.000639 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | A.1 | 0.000282 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | A.29 | 0.005319 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.18 | 0.010101 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.42 | 0.00004 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.70 | 0.000209 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.141 | 0.002012 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.176 | 0.000439 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.207 | 0.001182 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.277 | 0.000759 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.28 | 0.000311 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.411 | 0.014706 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.507 | 0.008696 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.139 | 0.000733 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.158 | 0.02381 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.177.17 | 0.000821 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.177.43 | 0.001477 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.221.2 | 0.004016 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.258.16 | 0.001637 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.258.22 | 0.002667 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.263 | 0.047619 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.36.36 | 0.000602 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.362.2 | 0.004717 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.366 | 0.004878 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.375 | 0.00082 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.509 | 0.000866 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.521 | 0.004975 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.582 | 0.000491 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.627 | 0.00202 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.1.631 | 0.003367 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp2 | 166 | T166I | aCt | aTt | 1 | 1 | P.1.17 | 0.000162 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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