CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S99del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp299S99del1S279del1deltCct-c210.51100-1102
ORF1ab/nsp299S99del1S279del1deltcCtc-210.51100-1102

Details of the mutation S99del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp299S99del1tCct-c12All0
ORF1ab/nsp299S99del1tcCtc-12All0
ORF1ab/nsp299S99del1tcCtc-11B.1.177.150.000631
ORF1ab/nsp299S99del1tCct-c11B.1.5960.000087