CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S99L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp299S99LS279LnonsyntCCtTA960.6666671100-1102
ORF1ab/nsp299S99LS279LnonsynTCCCTT910.1111111100-1102
ORF1ab/nsp299S99LS279LnonsyntCCtTG910.1111111100-1102
ORF1ab/nsp299S99LS279LnonsynTCcCTc910.1111111100-1102

Details of the mutation S99L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp299S99LtCCtTA69All0.000001
ORF1ab/nsp299S99LTCCCTT19All0
ORF1ab/nsp299S99LtCCtTG19All0
ORF1ab/nsp299S99LTCcCTc19All0
ORF1ab/nsp299S99LtCCtTA670.333333
ORF1ab/nsp299S99LTCcCTc170.055556
ORF1ab/nsp299S99LTCCCTT11AY.430.000004
ORF1ab/nsp299S99LtCCtTG11B.40.002208