CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S394A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2394S394AS574AnonsynTcaGca2032010.9901481985-1987
ORF1ab/nsp2394S394AS574AnonsynTcAGcG20320.009852221985-1987

Details of the mutation S394A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2394S394ATcaGca201203All0.000038
ORF1ab/nsp2394S394ATcAGcG2203All0
ORF1ab/nsp2394S394ATcaGca109109AY.40.00017
ORF1ab/nsp2394S394ATcaGca5353B.1.258.110.021007
ORF1ab/nsp2394S394ATcaGca2121AY.430.000093
ORF1ab/nsp2394S394ATcaGca56B.1.617.20.000019
ORF1ab/nsp2394S394ATcAGcG16B.1.617.20.000004
ORF1ab/nsp2394S394ATcaGca55P.10.000079
ORF1ab/nsp2394S394ATcaGca11AY.390.000025
ORF1ab/nsp2394S394ATcaGca11AY.50.000021
ORF1ab/nsp2394S394ATcaGca11AY.540.000095
ORF1ab/nsp2394S394ATcAGcG11AY.750.000056
ORF1ab/nsp2394S394ATcaGca11B.1.10.000018
ORF1ab/nsp2394S394ATcaGca11B.1.1.4120.007634
ORF1ab/nsp2394S394ATcaGca11B.1.1.5190.00004
ORF1ab/nsp2394S394ATcaGca11B.1.1.70.000001
ORF1ab/nsp2394S394ATcaGca11B.1.2210.000071