CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S36S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp236S36SS216SsyntcCtcT113926811392040.999944911-913
ORF1ab/nsp236S36SS216SsyntcCtcA1139268580.0000509099911-913
ORF1ab/nsp236S36SS216SsyntcCtcG113926860.00000526654911-913

Details of the mutation S36S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp236S36StcCtcT11392041139268All0.217886
ORF1ab/nsp236S36StcCtcA581139268All0.000011
ORF1ab/nsp236S36StcCtcG61139268All0.000001
ORF1ab/nsp236S36StcCtcT11046341104639B.1.1.70.988894
ORF1ab/nsp236S36StcCtcG51104639B.1.1.70.000004
ORF1ab/nsp236S36StcCtcT78557855Q.10.992294
ORF1ab/nsp236S36StcCtcT68666866Q.30.995794
ORF1ab/nsp236S36StcCtcT59495949Q.80.981036
ORF1ab/nsp236S36StcCtcT32373238B.1.10.058722
ORF1ab/nsp236S36StcCtcA13238B.1.10.000018
ORF1ab/nsp236S36StcCtcT21852185Q.40.993633
ORF1ab/nsp236S36StcCtcT16251625Q.20.996933
ORF1ab/nsp236S36StcCtcT14511453B.10.01329
ORF1ab/nsp236S36StcCtcA21453B.10.000018
ORF1ab/nsp236S36StcCtcT898898Q.70.997778
ORF1ab/nsp236S36StcCtcT346346B.1.36.260.988571
ORF1ab/nsp236S36StcCtcT267267B.1.617.20.001005
ORF1ab/nsp236S36StcCtcT252261AY.40.000392
ORF1ab/nsp236S36StcCtcA9261AY.40.000014
ORF1ab/nsp236S36StcCtcT206206B.1.177.730.116648
ORF1ab/nsp236S36StcCtcT183183AY.440.001114
ORF1ab/nsp236S36StcCtcT174176B.1.20.001532
ORF1ab/nsp236S36StcCtcA2176B.1.20.000018
ORF1ab/nsp236S36StcCtcT150150Q.60.993377
ORF1ab/nsp236S36StcCtcT132137B.1.1770.001738
ORF1ab/nsp236S36StcCtcA5137B.1.1770.000066
ORF1ab/nsp236S36StcCtcT131131AY.330.008748
ORF1ab/nsp236S36StcCtcT130130B.1.3750.106557
ORF1ab/nsp236S36StcCtcT102102AY.1030.000633
ORF1ab/nsp236S36StcCtcT8990AY.430.000394
ORF1ab/nsp236S36StcCtcA190AY.430.000004
ORF1ab/nsp236S36StcCtcT8383AY.50.001714
ORF1ab/nsp236S36StcCtcT6365P.10.000993
ORF1ab/nsp236S36StcCtcA265P.10.000032
ORF1ab/nsp236S36StcCtcT6262B.1.5260.001457
ORF1ab/nsp236S36StcCtcT6161AY.1210.008254
ORF1ab/nsp236S36StcCtcT5158B.1.4290.0012
ORF1ab/nsp236S36StcCtcA758B.1.4290.000165
ORF1ab/nsp236S36StcCtcT5858Q.50.983051
ORF1ab/nsp236S36StcCtcT5055AY.250.000301
ORF1ab/nsp236S36StcCtcA555AY.250.00003
ORF1ab/nsp236S36StcCtcT5454B.1.5760.048957
ORF1ab/nsp236S36StcCtcT4648B.1.1.5190.001827
ORF1ab/nsp236S36StcCtcA248B.1.1.5190.000079
ORF1ab/nsp236S36StcCtcT4848B.1.2210.00341
ORF1ab/nsp236S36StcCtcT4242B0.005368
ORF1ab/nsp236S36StcCtcT4141B.1.1.4090.116147
ORF1ab/nsp236S36StcCtcT4141B.1.1.5070.356522
ORF1ab/nsp236S36StcCtcT4040B.1.177.70.006594
ORF1ab/nsp236S36StcCtcT3838B.1.351.50.022782
ORF1ab/nsp236S36StcCtcT3838B.1.4270.001919
ORF1ab/nsp236S36StcCtcT3737B.1.3510.0011
ORF1ab/nsp236S36StcCtcT3436AY.30.000338
ORF1ab/nsp236S36StcCtcA236AY.30.00002
ORF1ab/nsp236S36StcCtcT3232B.1.1.2050.118959
ORF1ab/nsp236S36StcCtcT3232B.1.1600.000998
ORF1ab/nsp236S36StcCtcT3030B.1.2430.002088
ORF1ab/nsp236S36StcCtcT2929AY.1000.001334
ORF1ab/nsp236S36StcCtcT2829AY.260.000793
ORF1ab/nsp236S36StcCtcA129AY.260.000028
ORF1ab/nsp236S36StcCtcT2929B.1.177.600.006335
ORF1ab/nsp236S36StcCtcT2929B.1.5640.012351
ORF1ab/nsp236S36StcCtcT2829B.1.5960.00244
ORF1ab/nsp236S36StcCtcA129B.1.5960.000087
ORF1ab/nsp236S36StcCtcT2727AY.360.004002
ORF1ab/nsp236S36StcCtcT2727B.1.1.3120.051625
ORF1ab/nsp236S36StcCtcT2626AY.290.00041
ORF1ab/nsp236S36StcCtcT2525AY.1050.016077
ORF1ab/nsp236S36StcCtcT2525AY.1130.00356
ORF1ab/nsp236S36StcCtcT2525B.1.1.2980.021552
ORF1ab/nsp236S36StcCtcT2424AY.1020.000636
ORF1ab/nsp236S36StcCtcT2323AY.1160.006596
ORF1ab/nsp236S36StcCtcT2020P.1.10.006353
ORF1ab/nsp236S36StcCtcT1919B.1.1.2200.035316
ORF1ab/nsp236S36StcCtcT1818AY.200.0007
ORF1ab/nsp236S36StcCtcT1818AY.470.00056
ORF1ab/nsp236S36StcCtcT1818B.1.1.1610.063604
ORF1ab/nsp236S36StcCtcT1818B.1.5250.002037
ORF1ab/nsp236S36StcCtcT1717B.1.1.5280.081731
ORF1ab/nsp236S36StcCtcT1717C.370.001973
ORF1ab/nsp236S36StcCtcT1616AY.420.000644
ORF1ab/nsp236S36StcCtcT1616AY.750.000896
ORF1ab/nsp236S36StcCtcT1515AY.390.000371
ORF1ab/nsp236S36StcCtcT1415AY.4.20.000304
ORF1ab/nsp236S36StcCtcA115AY.4.20.000022
ORF1ab/nsp236S36StcCtcT1515AY.680.004106
ORF1ab/nsp236S36StcCtcT1515P.1.150.003485
ORF1ab/nsp236S36StcCtcT1313AY.340.001261
ORF1ab/nsp236S36StcCtcT1313B.1.177.420.011628
ORF1ab/nsp236S36StcCtcT1313B.1.2580.000865
ORF1ab/nsp236S36StcCtcT1213B.1.6370.000877
ORF1ab/nsp236S36StcCtcA113B.1.6370.000073
ORF1ab/nsp236S36StcCtcT12120.666667
ORF1ab/nsp236S36StcCtcT1212AY.300.004749
ORF1ab/nsp236S36StcCtcT1212AY.530.00345
ORF1ab/nsp236S36StcCtcT1212C.36.30.006807
ORF1ab/nsp236S36StcCtcT1111B.1.6230.005901
ORF1ab/nsp236S36StcCtcT1111P.1.160.004115
ORF1ab/nsp236S36StcCtcT1010B.1.1.2140.000555
ORF1ab/nsp236S36StcCtcT1010B.1.36.290.005173
ORF1ab/nsp236S36StcCtcT1010P.1.120.00484
ORF1ab/nsp236S36StcCtcT99AY.450.001095
ORF1ab/nsp236S36StcCtcT99AY.9.20.000331
ORF1ab/nsp236S36StcCtcT99B.1.1.330.003788
ORF1ab/nsp236S36StcCtcT99B.1.177.810.001704
ORF1ab/nsp236S36StcCtcT99B.1.3130.059211
ORF1ab/nsp236S36StcCtcT99B.1.360.001313
ORF1ab/nsp236S36StcCtcT99B.1.5950.002349
ORF1ab/nsp236S36StcCtcT78AY.610.000733
ORF1ab/nsp236S36StcCtcA18AY.610.000105
ORF1ab/nsp236S36StcCtcT88AY.860.006639
ORF1ab/nsp236S36StcCtcT88AY.920.002298
ORF1ab/nsp236S36StcCtcT88B.1.1.390.004077
ORF1ab/nsp236S36StcCtcT88B.1.1390.005865
ORF1ab/nsp236S36StcCtcT88B.1.2340.001056
ORF1ab/nsp236S36StcCtcT88B.1.617.10.001032
ORF1ab/nsp236S36StcCtcT67AY.1180.000376
ORF1ab/nsp236S36StcCtcA17AY.1180.000063
ORF1ab/nsp236S36StcCtcT77AY.690.001307
ORF1ab/nsp236S36StcCtcT77AY.940.003099
ORF1ab/nsp236S36StcCtcT57B.1.258.170.00052
ORF1ab/nsp236S36StcCtcA27B.1.258.170.000208
ORF1ab/nsp236S36StcCtcT77B.1.6090.003356
ORF1ab/nsp236S36StcCtcT77B.1.6210.00062
ORF1ab/nsp236S36StcCtcT77P.1.70.002235
ORF1ab/nsp236S36StcCtcT56A0.001935
ORF1ab/nsp236S36StcCtcA16A0.000387
ORF1ab/nsp236S36StcCtcT66AY.1170.000507
ORF1ab/nsp236S36StcCtcT66AY.1190.000212
ORF1ab/nsp236S36StcCtcT56AY.230.000349
ORF1ab/nsp236S36StcCtcG16AY.230.00007
ORF1ab/nsp236S36StcCtcT66AY.350.001398
ORF1ab/nsp236S36StcCtcT66AY.98.10.000291
ORF1ab/nsp236S36StcCtcT66B.1.1.2650.018927
ORF1ab/nsp236S36StcCtcT56D.20.000375
ORF1ab/nsp236S36StcCtcA16D.20.000075
ORF1ab/nsp236S36StcCtcT66P.1.170.000971
ORF1ab/nsp236S36StcCtcT66R.10.00054
ORF1ab/nsp236S36StcCtcT55AY.1200.000186
ORF1ab/nsp236S36StcCtcT55AY.16.10.00235
ORF1ab/nsp236S36StcCtcT55AY.4.40.002046
ORF1ab/nsp236S36StcCtcT55B.1.1.100.005574
ORF1ab/nsp236S36StcCtcT55B.1.1.280.001556
ORF1ab/nsp236S36StcCtcT55B.1.1.700.001705
ORF1ab/nsp236S36StcCtcT55B.1.1570.014925
ORF1ab/nsp236S36StcCtcT55B.1.2400.001078
ORF1ab/nsp236S36StcCtcT55B.1.258.140.004902
ORF1ab/nsp236S36StcCtcA45B.1.3620.006163
ORF1ab/nsp236S36StcCtcT15B.1.3620.001541
ORF1ab/nsp236S36StcCtcT55B.1.4110.018519
ORF1ab/nsp236S36StcCtcT55B.1.5770.003436
ORF1ab/nsp236S36StcCtcT55P.1.100.001347
ORF1ab/nsp236S36StcCtcT44A.10.001127
ORF1ab/nsp236S36StcCtcT44AY.1040.007937
ORF1ab/nsp236S36StcCtcT34AY.270.000194
ORF1ab/nsp236S36StcCtcA14AY.270.000065
ORF1ab/nsp236S36StcCtcT44AY.540.000381
ORF1ab/nsp236S36StcCtcT44B.1.1.2940.005063
ORF1ab/nsp236S36StcCtcT44B.1.1.500.002716
ORF1ab/nsp236S36StcCtcT44B.1.177.860.000734
ORF1ab/nsp236S36StcCtcT44B.1.177.870.002911
ORF1ab/nsp236S36StcCtcT44B.1.36.80.004
ORF1ab/nsp236S36StcCtcT44B.1.3690.001141
ORF1ab/nsp236S36StcCtcT44B.1.5900.018182
ORF1ab/nsp236S36StcCtcT44B.1.5990.014599
ORF1ab/nsp236S36StcCtcT44B.1.6270.008081
ORF1ab/nsp236S36StcCtcT44B.1.6280.001409
ORF1ab/nsp236S36StcCtcT44P.1.140.000191
ORF1ab/nsp236S36StcCtcT33A.2.50.001497
ORF1ab/nsp236S36StcCtcT33AY.130.000483
ORF1ab/nsp236S36StcCtcT23AY.140.000176
ORF1ab/nsp236S36StcCtcA13AY.140.000088
ORF1ab/nsp236S36StcCtcT33AY.3.10.000256
ORF1ab/nsp236S36StcCtcT33AY.380.001498
ORF1ab/nsp236S36StcCtcT33AY.4.2.10.000447
ORF1ab/nsp236S36StcCtcT33AY.460.000312
ORF1ab/nsp236S36StcCtcT23AY.5.40.000553
ORF1ab/nsp236S36StcCtcA13AY.5.40.000277
ORF1ab/nsp236S36StcCtcT33AY.740.000347
ORF1ab/nsp236S36StcCtcT33B.1.1.250.001706
ORF1ab/nsp236S36StcCtcT33B.1.1.3180.000905
ORF1ab/nsp236S36StcCtcT33B.1.160.280.008772
ORF1ab/nsp236S36StcCtcT33B.1.177.60.00293
ORF1ab/nsp236S36StcCtcT33B.1.177.750.003122
ORF1ab/nsp236S36StcCtcT33B.1.2060.002447
ORF1ab/nsp236S36StcCtcT33B.1.3490.002144
ORF1ab/nsp236S36StcCtcT33B.1.36.100.014354
ORF1ab/nsp236S36StcCtcT33B.1.4620.021739
ORF1ab/nsp236S36StcCtcT33B.1.466.20.001174
ORF1ab/nsp236S36StcCtcT33B.1.5650.002431
ORF1ab/nsp236S36StcCtcT33B.1.6190.002613
ORF1ab/nsp236S36StcCtcT33B.1.6200.002838
ORF1ab/nsp236S36StcCtcT33B.1.6330.125
ORF1ab/nsp236S36StcCtcT22AY.1010.000981
ORF1ab/nsp236S36StcCtcT22AY.160.000759
ORF1ab/nsp236S36StcCtcT22AY.240.000862
ORF1ab/nsp236S36StcCtcA12AY.34.10.00051
ORF1ab/nsp236S36StcCtcT12AY.34.10.00051
ORF1ab/nsp236S36StcCtcT22AY.4.30.001684
ORF1ab/nsp236S36StcCtcA12AY.5.30.000337
ORF1ab/nsp236S36StcCtcT12AY.5.30.000337
ORF1ab/nsp236S36StcCtcT22AY.520.001629
ORF1ab/nsp236S36StcCtcT22AY.570.001312
ORF1ab/nsp236S36StcCtcT22AY.670.000929
ORF1ab/nsp236S36StcCtcT22AY.75.10.000361
ORF1ab/nsp236S36StcCtcT22AY.840.000875
ORF1ab/nsp236S36StcCtcT22AY.850.000854
ORF1ab/nsp236S36StcCtcT22AY.90.000135
ORF1ab/nsp236S36StcCtcT22AY.980.000158
ORF1ab/nsp236S36StcCtcT22B.1.1.2220.000408
ORF1ab/nsp236S36StcCtcT22B.1.1.2840.000215
ORF1ab/nsp236S36StcCtcT22B.1.1.3150.016949
ORF1ab/nsp236S36StcCtcT22B.1.1.3170.000823
ORF1ab/nsp236S36StcCtcT22B.1.1.3480.001592
ORF1ab/nsp236S36StcCtcT22B.1.1.370.000386
ORF1ab/nsp236S36StcCtcT22B.1.1.3700.025316
ORF1ab/nsp236S36StcCtcT22B.1.1.5230.003125
ORF1ab/nsp236S36StcCtcT22B.1.1.5250.010929
ORF1ab/nsp236S36StcCtcT22B.1.1700.008621
ORF1ab/nsp236S36StcCtcT22B.1.177.150.001262
ORF1ab/nsp236S36StcCtcT22B.1.177.310.022989
ORF1ab/nsp236S36StcCtcT22B.1.177.410.005
ORF1ab/nsp236S36StcCtcT22B.1.177.520.003515
ORF1ab/nsp236S36StcCtcT22B.1.2100.004264
ORF1ab/nsp236S36StcCtcT22B.1.2140.007326
ORF1ab/nsp236S36StcCtcT22B.1.214.20.001199
ORF1ab/nsp236S36StcCtcT22B.1.2370.00995
ORF1ab/nsp236S36StcCtcT22B.1.3110.000549
ORF1ab/nsp236S36StcCtcT22B.1.36.10.002281
ORF1ab/nsp236S36StcCtcT22B.1.3670.001585
ORF1ab/nsp236S36StcCtcT22B.1.3960.001411
ORF1ab/nsp236S36StcCtcT22B.1.4360.002058
ORF1ab/nsp236S36StcCtcT22B.1.4560.006536
ORF1ab/nsp236S36StcCtcT22B.1.5240.002813
ORF1ab/nsp236S36StcCtcT22B.1.5440.012048
ORF1ab/nsp236S36StcCtcT22B.1.564.10.003155
ORF1ab/nsp236S36StcCtcT22B.1.5750.000607
ORF1ab/nsp236S36StcCtcT22B.1.575.10.004878
ORF1ab/nsp236S36StcCtcT22B.1.5800.00813
ORF1ab/nsp236S36StcCtcT22B.1.780.017094
ORF1ab/nsp236S36StcCtcT22B.1.9.50.011364
ORF1ab/nsp236S36StcCtcT22C.390.037736
ORF1ab/nsp236S36StcCtcT22P.1.10.10.01626
ORF1ab/nsp236S36StcCtcT22P.20.000373
ORF1ab/nsp236S36StcCtcT11A.20.000662
ORF1ab/nsp236S36StcCtcT11A.2.5.20.001572
ORF1ab/nsp236S36StcCtcT11A.23.10.000704
ORF1ab/nsp236S36StcCtcT11A.270.001656
ORF1ab/nsp236S36StcCtcT11A.280.002646
ORF1ab/nsp236S36StcCtcT11A.70.055556
ORF1ab/nsp236S36StcCtcT11AU.20.002421
ORF1ab/nsp236S36StcCtcT11AY.1060.000335
ORF1ab/nsp236S36StcCtcT11AY.1090.00074
ORF1ab/nsp236S36StcCtcT11AY.1110.000183
ORF1ab/nsp236S36StcCtcT11AY.1140.000231
ORF1ab/nsp236S36StcCtcT11AY.116.10.000311
ORF1ab/nsp236S36StcCtcT11AY.20.000356
ORF1ab/nsp236S36StcCtcT11AY.210.001898
ORF1ab/nsp236S36StcCtcT11AY.280.00189
ORF1ab/nsp236S36StcCtcT11AY.39.10.00004
ORF1ab/nsp236S36StcCtcT11AY.410.000294
ORF1ab/nsp236S36StcCtcT11AY.46.40.000165
ORF1ab/nsp236S36StcCtcT11AY.46.50.000198
ORF1ab/nsp236S36StcCtcT11AY.500.000799
ORF1ab/nsp236S36StcCtcT11AY.550.000917
ORF1ab/nsp236S36StcCtcT11AY.560.001605
ORF1ab/nsp236S36StcCtcT11AY.590.00053
ORF1ab/nsp236S36StcCtcT11AY.60.000041
ORF1ab/nsp236S36StcCtcT11AY.630.000387
ORF1ab/nsp236S36StcCtcT11AY.70.000196
ORF1ab/nsp236S36StcCtcT11AY.700.000209
ORF1ab/nsp236S36StcCtcT11AY.770.001127
ORF1ab/nsp236S36StcCtcT11AY.820.001357
ORF1ab/nsp236S36StcCtcT11AY.9.10.000084
ORF1ab/nsp236S36StcCtcT11AY.990.001049
ORF1ab/nsp236S36StcCtcT11AY.99.20.000092
ORF1ab/nsp236S36StcCtcT11B.1.1.10.000327
ORF1ab/nsp236S36StcCtcT11B.1.1.1410.002012
ORF1ab/nsp236S36StcCtcT11B.1.1.1530.001095
ORF1ab/nsp236S36StcCtcT11B.1.1.1690.018182
ORF1ab/nsp236S36StcCtcT11B.1.1.1700.001247
ORF1ab/nsp236S36StcCtcT11B.1.1.1710.003676
ORF1ab/nsp236S36StcCtcT11B.1.1.1760.000439
ORF1ab/nsp236S36StcCtcT11B.1.1.2160.00089
ORF1ab/nsp236S36StcCtcT11B.1.1.2280.003049
ORF1ab/nsp236S36StcCtcT11B.1.1.2360.006897
ORF1ab/nsp236S36StcCtcT11B.1.1.2770.000759
ORF1ab/nsp236S36StcCtcT11B.1.1.2790.001121
ORF1ab/nsp236S36StcCtcT11B.1.1.2800.003086
ORF1ab/nsp236S36StcCtcT11B.1.1.2910.000742
ORF1ab/nsp236S36StcCtcT11B.1.1.3010.001179
ORF1ab/nsp236S36StcCtcT11B.1.1.3040.002809
ORF1ab/nsp236S36StcCtcT11B.1.1.340.013158
ORF1ab/nsp236S36StcCtcT11B.1.1.3560.008547
ORF1ab/nsp236S36StcCtcT11B.1.1.3650.005587
ORF1ab/nsp236S36StcCtcT11B.1.1.3690.000446
ORF1ab/nsp236S36StcCtcT11B.1.1.3740.002375
ORF1ab/nsp236S36StcCtcT11B.1.1.3890.006061
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