CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S36F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp236S36FS216FnonsyntCctTc352725160.713354911-913
ORF1ab/nsp236S36FS216FnonsyntCCtTT352710110.286646911-913

Details of the mutation S36F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp236S36FtCctTc25163527All0.000481
ORF1ab/nsp236S36FtCCtTT10113527All0.000193
ORF1ab/nsp236S36FtCctTc18541854AY.40.002886
ORF1ab/nsp236S36FtCCtTT994994B.1.1.70.00089
ORF1ab/nsp236S36FtCctTc143143B.1.617.20.000538
ORF1ab/nsp236S36FtCctTc4444AY.430.000195
ORF1ab/nsp236S36FtCctTc4242AY.610.004401
ORF1ab/nsp236S36FtCctTc3941B.1.1.10.012741
ORF1ab/nsp236S36FtCCtTT241B.1.1.10.000653
ORF1ab/nsp236S36FtCctTc3838AY.1030.000236
ORF1ab/nsp236S36FtCctTc3434AY.460.003539
ORF1ab/nsp236S36FtCctTc3030B.1.20.000264
ORF1ab/nsp236S36FtCctTc2020AY.250.00012
ORF1ab/nsp236S36FtCctTc1416B.10.000128
ORF1ab/nsp236S36FtCCtTT216B.10.000018
ORF1ab/nsp236S36FtCctTc1616B.1.5250.001811
ORF1ab/nsp236S36FtCctTc1414P.10.000221
ORF1ab/nsp236S36FtCctTc1313B.1.1770.000171
ORF1ab/nsp236S36FtCctTc1212AY.1200.000446
ORF1ab/nsp236S36FtCctTc912B.1.10.000163
ORF1ab/nsp236S36FtCCtTT312B.1.10.000054
ORF1ab/nsp236S36FtCctTc1010AY.440.000061
ORF1ab/nsp236S36FtCctTc99AY.30.00009
ORF1ab/nsp236S36FtCctTc88AY.1020.000212
ORF1ab/nsp236S36FtCctTc66B.1.2360.01232
ORF1ab/nsp236S36FtCctTc66B.1.6280.002114
ORF1ab/nsp236S36FtCctTc66D.20.00045
ORF1ab/nsp236S36FtCctTc55AY.390.000124
ORF1ab/nsp236S36FtCctTc55B.1.1600.000156
ORF1ab/nsp236S36FtCctTc55B.1.177.210.000382
ORF1ab/nsp236S36FtCctTc44AY.200.000155
ORF1ab/nsp236S36FtCctTc44AY.420.000161
ORF1ab/nsp236S36FtCctTc44AY.470.000124
ORF1ab/nsp236S36FtCctTc44B.1.1.1530.004381
ORF1ab/nsp236S36FtCctTc44B.1.1.5190.000159
ORF1ab/nsp236S36FtCctTc44B.1.160.310.032258
ORF1ab/nsp236S36FtCctTc44B.1.258.170.000416
ORF1ab/nsp236S36FtCctTc44B.1.4290.000094
ORF1ab/nsp236S36FtCctTc44B.1.5680.004444
ORF1ab/nsp236S36FtCctTc44B.1.6090.001918
ORF1ab/nsp236S36FtCctTc33AY.130.000483
ORF1ab/nsp236S36FtCctTc33AY.260.000085
ORF1ab/nsp236S36FtCctTc33AY.330.0002
ORF1ab/nsp236S36FtCctTc33AY.4.20.000065
ORF1ab/nsp236S36FtCctTc33B.1.1.1920.006928
ORF1ab/nsp236S36FtCctTc33B.1.617.10.000387
ORF1ab/nsp236S36FtCctTc33C.36.30.001702
ORF1ab/nsp236S36FtCCtTT33Q.30.000435
ORF1ab/nsp236S36FtCCtTT33Q.80.000495
ORF1ab/nsp236S36FtCCtTT120.055556
ORF1ab/nsp236S36FtCctTc120.055556
ORF1ab/nsp236S36FtCctTc22AY.10.000791
ORF1ab/nsp236S36FtCctTc22AY.100.00106
ORF1ab/nsp236S36FtCctTc22AY.116.10.000623
ORF1ab/nsp236S36FtCctTc22AY.240.000862
ORF1ab/nsp236S36FtCctTc22AY.3.10.000171
ORF1ab/nsp236S36FtCctTc22AY.4.50.000215
ORF1ab/nsp236S36FtCctTc22AY.50.000041
ORF1ab/nsp236S36FtCctTc22AY.650.001066
ORF1ab/nsp236S36FtCctTc22AY.750.000112
ORF1ab/nsp236S36FtCctTc22AY.75.10.000361
ORF1ab/nsp236S36FtCctTc22AY.9.20.000073
ORF1ab/nsp236S36FtCctTc22B.1.1.830.00542
ORF1ab/nsp236S36FtCctTc22B.1.2390.002442
ORF1ab/nsp236S36FtCctTc22B.1.2580.000133
ORF1ab/nsp236S36FtCctTc22B.1.6210.000177
ORF1ab/nsp236S36FtCCtTT22Q.10.000253
ORF1ab/nsp236S36FtCctTc11AY.1010.00049
ORF1ab/nsp236S36FtCctTc11AY.1130.000142
ORF1ab/nsp236S36FtCctTc11AY.1190.000035
ORF1ab/nsp236S36FtCctTc11AY.1210.000135
ORF1ab/nsp236S36FtCctTc11AY.160.00038
ORF1ab/nsp236S36FtCctTc11AY.16.10.00047
ORF1ab/nsp236S36FtCctTc11AY.230.00007
ORF1ab/nsp236S36FtCctTc11AY.290.000016
ORF1ab/nsp236S36FtCctTc11AY.39.10.00004
ORF1ab/nsp236S36FtCctTc11AY.4.30.000842
ORF1ab/nsp236S36FtCctTc11AY.46.50.000198
ORF1ab/nsp236S36FtCctTc11AY.550.000917
ORF1ab/nsp236S36FtCctTc11AY.60.000041
ORF1ab/nsp236S36FtCctTc11AY.680.000274
ORF1ab/nsp236S36FtCctTc11AY.70.000196
ORF1ab/nsp236S36FtCctTc11AY.850.000427
ORF1ab/nsp236S36FtCctTc11AY.99.10.001553
ORF1ab/nsp236S36FtCctTc11AY.99.20.000092
ORF1ab/nsp236S36FtCctTc11B.1.1.1760.000439
ORF1ab/nsp236S36FtCctTc11B.1.1.2140.000055
ORF1ab/nsp236S36FtCctTc11B.1.1.3010.001179
ORF1ab/nsp236S36FtCctTc11B.1.1.3120.001912
ORF1ab/nsp236S36FtCctTc11B.1.1.3720.000689
ORF1ab/nsp236S36FtCctTc11B.1.177.60.000977
ORF1ab/nsp236S36FtCctTc11B.1.177.600.000218
ORF1ab/nsp236S36FtCctTc11B.1.2060.000816
ORF1ab/nsp236S36FtCctTc11B.1.2210.000071
ORF1ab/nsp236S36FtCctTc11B.1.3110.000275
ORF1ab/nsp236S36FtCctTc11B.1.3240.001605
ORF1ab/nsp236S36FtCctTc11B.1.3510.00003
ORF1ab/nsp236S36FtCctTc11B.1.36.170.000494
ORF1ab/nsp236S36FtCctTc11B.1.36.240.006173
ORF1ab/nsp236S36FtCctTc11B.1.3890.001002
ORF1ab/nsp236S36FtCctTc11B.1.5760.000907
ORF1ab/nsp236S36FtCctTc11B.1.5950.000261
ORF1ab/nsp236S36FtCctTc11B.1.5960.000087
ORF1ab/nsp236S36FtCctTc11C.230.005814
ORF1ab/nsp236S36FtCctTc11C.80.004464
ORF1ab/nsp236S36FtCctTc11P.1.140.000048
ORF1ab/nsp236S36FtCctTc11P.1.150.000232
ORF1ab/nsp236S36FtCctTc11P.1.70.000319
ORF1ab/nsp236S36FtCctTc11P.20.000187
ORF1ab/nsp236S36FtCCtTT11Q.40.000455