CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S358A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2358S358AS538AnonsynTcaGca12050120490.9999171877-1879
ORF1ab/nsp2358S358AS538AnonsynTcAGcG1205010.00008298751877-1879

Details of the mutation S358A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2358S358ATcaGca1204912050All0.002305
ORF1ab/nsp2358S358ATcAGcG112050All0
ORF1ab/nsp2358S358ATcaGca1101211013AY.140.969196
ORF1ab/nsp2358S358ATcAGcG111013AY.140.000088
ORF1ab/nsp2358S358ATcaGca280280B.1.617.20.001054
ORF1ab/nsp2358S358ATcaGca138138AY.540.013158
ORF1ab/nsp2358S358ATcaGca7474AY.190.084379
ORF1ab/nsp2358S358ATcaGca6565AY.380.032451
ORF1ab/nsp2358S358ATcaGca4646AY.980.003634
ORF1ab/nsp2358S358ATcaGca4040AY.130.006439
ORF1ab/nsp2358S358ATcaGca3939AY.640.023214
ORF1ab/nsp2358S358ATcaGca3232AY.440.000195
ORF1ab/nsp2358S358ATcaGca2222AY.430.000097
ORF1ab/nsp2358S358ATcaGca1717AY.620.007407
ORF1ab/nsp2358S358ATcaGca1414AY.480.006512
ORF1ab/nsp2358S358ATcaGca1313AY.510.011818
ORF1ab/nsp2358S358ATcaGca1313AY.650.00693
ORF1ab/nsp2358S358ATcaGca1313AY.780.020031
ORF1ab/nsp2358S358ATcaGca1010AY.750.00056
ORF1ab/nsp2358S358ATcaGca1010AY.75.10.001803
ORF1ab/nsp2358S358ATcaGca99AY.250.000054
ORF1ab/nsp2358S358ATcaGca88AY.16.10.003759
ORF1ab/nsp2358S358ATcaGca88B.1.1.3750.095238
ORF1ab/nsp2358S358ATcaGca77AY.470.000218
ORF1ab/nsp2358S358ATcaGca77AY.520.0057
ORF1ab/nsp2358S358ATcaGca77AY.610.000733
ORF1ab/nsp2358S358ATcaGca77B.10.000064
ORF1ab/nsp2358S358ATcaGca66AY.1020.000159
ORF1ab/nsp2358S358ATcaGca66AY.1030.000037
ORF1ab/nsp2358S358ATcaGca66AY.230.000418
ORF1ab/nsp2358S358ATcaGca66AY.30.00006
ORF1ab/nsp2358S358ATcaGca66AY.330.000401
ORF1ab/nsp2358S358ATcaGca66AY.40.000009
ORF1ab/nsp2358S358ATcaGca66AY.490.019169
ORF1ab/nsp2358S358ATcaGca66AY.680.001642
ORF1ab/nsp2358S358ATcaGca66B.1.1.70.000005
ORF1ab/nsp2358S358ATcaGca55AY.770.005637
ORF1ab/nsp2358S358ATcaGca55AY.810.00996
ORF1ab/nsp2358S358ATcaGca55AY.98.10.000242
ORF1ab/nsp2358S358ATcaGca44AY.1170.000338
ORF1ab/nsp2358S358ATcaGca44AY.500.003197
ORF1ab/nsp2358S358ATcaGca44AY.590.002119
ORF1ab/nsp2358S358ATcaGca44AY.9.20.000147
ORF1ab/nsp2358S358ATcaGca33AY.390.000074
ORF1ab/nsp2358S358ATcaGca33AY.560.004815
ORF1ab/nsp2358S358ATcaGca33AY.660.003209
ORF1ab/nsp2358S358ATcaGca33AY.860.00249
ORF1ab/nsp2358S358ATcaGca33AY.870.002498
ORF1ab/nsp2358S358ATcaGca33AY.90.000203
ORF1ab/nsp2358S358ATcaGca22AY.100.00106
ORF1ab/nsp2358S358ATcaGca22AY.1140.000462
ORF1ab/nsp2358S358ATcaGca22AY.160.000759
ORF1ab/nsp2358S358ATcaGca22AY.240.000862
ORF1ab/nsp2358S358ATcaGca22AY.300.000791
ORF1ab/nsp2358S358ATcaGca22AY.460.000208
ORF1ab/nsp2358S358ATcaGca22AY.5.40.000553
ORF1ab/nsp2358S358ATcaGca22AY.710.00095
ORF1ab/nsp2358S358ATcaGca22AY.850.000854
ORF1ab/nsp2358S358ATcaGca22B.1.1.3170.000823
ORF1ab/nsp2358S358ATcaGca22B.1.1.3720.001377
ORF1ab/nsp2358S358ATcaGca22B.1.177.180.00232
ORF1ab/nsp2358S358ATcaGca22B.1.20.000018
ORF1ab/nsp2358S358ATcaGca11AY.1000.000046
ORF1ab/nsp2358S358ATcaGca11AY.1060.000335
ORF1ab/nsp2358S358ATcaGca11AY.1160.000287
ORF1ab/nsp2358S358ATcaGca11AY.1190.000035
ORF1ab/nsp2358S358ATcaGca11AY.120.10.000321
ORF1ab/nsp2358S358ATcaGca11AY.120.20.001285
ORF1ab/nsp2358S358ATcaGca11AY.1210.000135
ORF1ab/nsp2358S358ATcaGca11AY.210.001898
ORF1ab/nsp2358S358ATcaGca11AY.260.000028
ORF1ab/nsp2358S358ATcaGca11AY.290.000016
ORF1ab/nsp2358S358ATcaGca11AY.400.000964
ORF1ab/nsp2358S358ATcaGca11AY.420.00004
ORF1ab/nsp2358S358ATcaGca11AY.450.000122
ORF1ab/nsp2358S358ATcaGca11AY.550.000917
ORF1ab/nsp2358S358ATcaGca11AY.670.000464
ORF1ab/nsp2358S358ATcaGca11AY.690.000187
ORF1ab/nsp2358S358ATcaGca11AY.700.000209
ORF1ab/nsp2358S358ATcaGca11AY.720.001361
ORF1ab/nsp2358S358ATcaGca11AY.730.000665
ORF1ab/nsp2358S358ATcaGca11AY.900.000684
ORF1ab/nsp2358S358ATcaGca11AY.99.10.001553
ORF1ab/nsp2358S358ATcaGca11B0.000128
ORF1ab/nsp2358S358ATcaGca11B.1.10.000018
ORF1ab/nsp2358S358ATcaGca11B.1.1.1700.001247
ORF1ab/nsp2358S358ATcaGca11B.1.1.3260.001761
ORF1ab/nsp2358S358ATcaGca11B.1.1.630.000386
ORF1ab/nsp2358S358ATcaGca11B.1.4090.000781
ORF1ab/nsp2358S358ATcaGca11B.1.416.10.001563
ORF1ab/nsp2358S358ATcaGca11B.1.617.10.000129