CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S263del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2263S263del1S443del1delTcc-cc1180.7272731592-1594
ORF1ab/nsp2263S263del1S443del1deltCct-c1130.2727271592-1594

Details of the mutation S263del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2263S263del1Tcc-cc811All0.000002
ORF1ab/nsp2263S263del1tCct-c311All0.000001
ORF1ab/nsp2263S263del1Tcc-cc44AY.250.000024
ORF1ab/nsp2263S263del1tCct-c11AY.260.000028
ORF1ab/nsp2263S263del1Tcc-cc11AY.430.000004
ORF1ab/nsp2263S263del1tCct-c11AY.440.000006
ORF1ab/nsp2263S263del1Tcc-cc11B.1.10.000018
ORF1ab/nsp2263S263del1Tcc-cc11B.1.1.70.000001
ORF1ab/nsp2263S263del1Tcc-cc11B.1.36.290.000517
ORF1ab/nsp2263S263del1tCct-c11B.1.617.20.000004