CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S263P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2263S263PS443PnonsynTccCcc261225980.994641592-1594
ORF1ab/nsp2263S263PS443PnonsynTcCCcT2612130.004977031592-1594
ORF1ab/nsp2263S263PS443PnonsynTcCCcG261210.0003828481592-1594

Details of the mutation S263P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2263S263PTccCcc25982612All0.000497
ORF1ab/nsp2263S263PTcCCcT132612All0.000002
ORF1ab/nsp2263S263PTcCCcG12612All0
ORF1ab/nsp2263S263PTccCcc549549B.1.1.3330.590958
ORF1ab/nsp2263S263PTccCcc422422AY.1030.00262
ORF1ab/nsp2263S263PTccCcc336336B.1.1.70.000301
ORF1ab/nsp2263S263PTccCcc208208R.10.018722
ORF1ab/nsp2263S263PTccCcc150150B.1.160.290.632911
ORF1ab/nsp2263S263PTccCcc139139AY.60.005717
ORF1ab/nsp2263S263PTccCcc137138B.1.617.20.000516
ORF1ab/nsp2263S263PTcCCcT1138B.1.617.20.000004
ORF1ab/nsp2263S263PTccCcc9696B.1.2430.00668
ORF1ab/nsp2263S263PTccCcc7880B.10.000714
ORF1ab/nsp2263S263PTcCCcT280B.10.000018
ORF1ab/nsp2263S263PTccCcc6667AY.4.20.001431
ORF1ab/nsp2263S263PTcCCcT167AY.4.20.000022
ORF1ab/nsp2263S263PTccCcc4848AY.40.000075
ORF1ab/nsp2263S263PTccCcc4545P.10.000709
ORF1ab/nsp2263S263PTccCcc4242AY.250.000253
ORF1ab/nsp2263S263PTccCcc2121B.1.1770.000277
ORF1ab/nsp2263S263PTccCcc1616B.1.10.00029
ORF1ab/nsp2263S263PTccCcc1516B.1.20.000132
ORF1ab/nsp2263S263PTcCCcG116B.1.20.000009
ORF1ab/nsp2263S263PTccCcc1515AY.1210.00203
ORF1ab/nsp2263S263PTccCcc1414B.1.1.3060.006138
ORF1ab/nsp2263S263PTccCcc1111AY.270.000712
ORF1ab/nsp2263S263PTccCcc1111B.1.4480.028871
ORF1ab/nsp2263S263PTccCcc1010AY.390.000247
ORF1ab/nsp2263S263PTccCcc1010B.1.1600.000312
ORF1ab/nsp2263S263PTccCcc78AY.440.000043
ORF1ab/nsp2263S263PTcCCcT18AY.440.000006
ORF1ab/nsp2263S263PTccCcc77B.1.360.001021
ORF1ab/nsp2263S263PTccCcc66AU.20.014528
ORF1ab/nsp2263S263PTccCcc66B.1.4560.019608
ORF1ab/nsp2263S263PTccCcc55AY.450.000608
ORF1ab/nsp2263S263PTccCcc55B.1.4290.000118
ORF1ab/nsp2263S263PTccCcc55B.1.6100.01773
ORF1ab/nsp2263S263PTccCcc44AY.1000.000184
ORF1ab/nsp2263S263PTccCcc44AY.30.00004
ORF1ab/nsp2263S263PTccCcc44B.1.1.10.001307
ORF1ab/nsp2263S263PTcCCcT44B.1.1.3440.043011
ORF1ab/nsp2263S263PTccCcc44B.1.3690.001141
ORF1ab/nsp2263S263PTccCcc44B.1.5260.000094
ORF1ab/nsp2263S263PTcCCcT34B.1.6090.001438
ORF1ab/nsp2263S263PTccCcc14B.1.6090.000479
ORF1ab/nsp2263S263PTccCcc33AY.1100.000338
ORF1ab/nsp2263S263PTccCcc33AY.260.000085
ORF1ab/nsp2263S263PTccCcc33AY.50.000062
ORF1ab/nsp2263S263PTccCcc33B.1.177.870.002183
ORF1ab/nsp2263S263PTccCcc22A.2.50.000998
ORF1ab/nsp2263S263PTccCcc22A.23.10.001408
ORF1ab/nsp2263S263PTccCcc22AY.1170.000169
ORF1ab/nsp2263S263PTccCcc22AY.120.10.000642
ORF1ab/nsp2263S263PTccCcc22AY.230.000139
ORF1ab/nsp2263S263PTccCcc22AY.660.002139
ORF1ab/nsp2263S263PTccCcc22B.1.1.2220.000408
ORF1ab/nsp2263S263PTccCcc22B.1.1.2970.004474
ORF1ab/nsp2263S263PTccCcc22B.1.1.5190.000079
ORF1ab/nsp2263S263PTccCcc22B.1.2340.000264
ORF1ab/nsp2263S263PTccCcc22B.1.2580.000133
ORF1ab/nsp2263S263PTccCcc22B.1.258.110.000793
ORF1ab/nsp2263S263PTccCcc22B.1.36.310.003503
ORF1ab/nsp2263S263PTccCcc22B.1.5250.000226
ORF1ab/nsp2263S263PTccCcc22N.50.003534
ORF1ab/nsp2263S263PTccCcc22P.1.150.000465
ORF1ab/nsp2263S263PTccCcc11A.10.000282
ORF1ab/nsp2263S263PTccCcc11AY.1020.000027
ORF1ab/nsp2263S263PTccCcc11AY.1140.000231
ORF1ab/nsp2263S263PTccCcc11AY.290.000016
ORF1ab/nsp2263S263PTccCcc11AY.29.10.000221
ORF1ab/nsp2263S263PTccCcc11AY.3.10.000085
ORF1ab/nsp2263S263PTccCcc11AY.360.000148
ORF1ab/nsp2263S263PTccCcc11AY.430.000004
ORF1ab/nsp2263S263PTccCcc11AY.460.000104
ORF1ab/nsp2263S263PTccCcc11AY.46.60.000072
ORF1ab/nsp2263S263PTccCcc11AY.470.000031
ORF1ab/nsp2263S263PTccCcc11AY.750.000056
ORF1ab/nsp2263S263PTccCcc11AY.80.000606
ORF1ab/nsp2263S263PTccCcc11AY.9.20.000037
ORF1ab/nsp2263S263PTccCcc11AZ.30.00152
ORF1ab/nsp2263S263PTccCcc11B.1.1.1150.008929
ORF1ab/nsp2263S263PTccCcc11B.1.1.1760.000439
ORF1ab/nsp2263S263PTccCcc11B.1.1.2140.000055
ORF1ab/nsp2263S263PTccCcc11B.1.1.2360.006897
ORF1ab/nsp2263S263PTccCcc11B.1.1.2840.000107
ORF1ab/nsp2263S263PTccCcc11B.1.1.2940.001266
ORF1ab/nsp2263S263PTccCcc11B.1.1.3160.000925
ORF1ab/nsp2263S263PTccCcc11B.1.1.3200.018182
ORF1ab/nsp2263S263PTccCcc11B.1.1.3250.025641
ORF1ab/nsp2263S263PTccCcc11B.1.1.330.000421
ORF1ab/nsp2263S263PTccCcc11B.1.1.3540.004386
ORF1ab/nsp2263S263PTcCCcT11B.1.1.440.00241
ORF1ab/nsp2263S263PTccCcc11B.1.1.4480.002033
ORF1ab/nsp2263S263PTccCcc11B.1.1.630.000386
ORF1ab/nsp2263S263PTccCcc11B.1.1.700.000341
ORF1ab/nsp2263S263PTccCcc11B.1.177.40.000211
ORF1ab/nsp2263S263PTccCcc11B.1.177.460.000918
ORF1ab/nsp2263S263PTccCcc11B.1.177.570.000281
ORF1ab/nsp2263S263PTccCcc11B.1.177.70.000165
ORF1ab/nsp2263S263PTccCcc11B.1.1920.009259
ORF1ab/nsp2263S263PTccCcc11B.1.2210.000071
ORF1ab/nsp2263S263PTccCcc11B.1.2390.001221
ORF1ab/nsp2263S263PTccCcc11B.1.2410.000812
ORF1ab/nsp2263S263PTccCcc11B.1.2470.014925
ORF1ab/nsp2263S263PTccCcc11B.1.258.170.000104
ORF1ab/nsp2263S263PTccCcc11B.1.3280.03125
ORF1ab/nsp2263S263PTccCcc11B.1.36.160.001425
ORF1ab/nsp2263S263PTccCcc11B.1.36.80.001
ORF1ab/nsp2263S263PTccCcc11B.1.4590.004082
ORF1ab/nsp2263S263PTccCcc11B.1.466.20.000391
ORF1ab/nsp2263S263PTccCcc11B.1.4690.00361
ORF1ab/nsp2263S263PTccCcc11B.1.5380.008065
ORF1ab/nsp2263S263PTccCcc11B.1.596.10.009346
ORF1ab/nsp2263S263PTccCcc11B.1.617.10.000129
ORF1ab/nsp2263S263PTccCcc11B.1.6230.000536
ORF1ab/nsp2263S263PTccCcc11B.390.002331
ORF1ab/nsp2263S263PTccCcc11C.260.007353
ORF1ab/nsp2263S263PTccCcc11L.30.003546
ORF1ab/nsp2263S263PTccCcc11Q.80.000165