CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = S248del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2248S248del1S428del1delAgc-gc530.61547-1549
ORF1ab/nsp2248S248del1S428del1delaGca-c520.41547-1549

Details of the mutation S248del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2248S248del1Agc-gc35All0.000001
ORF1ab/nsp2248S248del1aGca-c25All0
ORF1ab/nsp2248S248del1aGca-c11AY.20.000356
ORF1ab/nsp2248S248del1Agc-gc11B.1.1.70.000001
ORF1ab/nsp2248S248del1aGca-c11B.1.20.000009
ORF1ab/nsp2248S248del1Agc-gc11B.1.4290.000024
ORF1ab/nsp2248S248del1Agc-gc11B.1.5330.009615