CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = R4del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp24R4delR184deldelCGC---45451815-817

Details of the mutation R4del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp24R4delCGC---4545All0.000009
ORF1ab/nsp24R4delCGC---66B.1.1.70.000005
ORF1ab/nsp24R4delCGC---55B.1.1.330.002104
ORF1ab/nsp24R4delCGC---44AY.250.000024
ORF1ab/nsp24R4delCGC---44B.1.1.3480.003185
ORF1ab/nsp24R4delCGC---33B.10.000027
ORF1ab/nsp24R4delCGC---22B.1.617.20.000008
ORF1ab/nsp24R4delCGC---22N.40.008511
ORF1ab/nsp24R4delCGC---22N.60.014184
ORF1ab/nsp24R4delCGC---22P.20.000373
ORF1ab/nsp24R4delCGC---11A.2.20.001689
ORF1ab/nsp24R4delCGC---11AY.1110.000183
ORF1ab/nsp24R4delCGC---11AY.4.50.000107
ORF1ab/nsp24R4delCGC---11AY.430.000004
ORF1ab/nsp24R4delCGC---11B.1.10.000018
ORF1ab/nsp24R4delCGC---11B.1.1.4200.001006
ORF1ab/nsp24R4delCGC---11B.1.177.830.001481
ORF1ab/nsp24R4delCGC---11B.1.351.30.000876
ORF1ab/nsp24R4delCGC---11B.1.360.000146
ORF1ab/nsp24R4delCGC---11B.1.4270.00005
ORF1ab/nsp24R4delCGC---11B.1.4290.000024
ORF1ab/nsp24R4delCGC---11B.1.617.30.002985
ORF1ab/nsp24R4delCGC---11B.1.6380.052632
ORF1ab/nsp24R4delCGC---11C.350.000774
ORF1ab/nsp24R4delCGC---11Q.20.000613