CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = R380del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2380R380delR560deldelCGT---454511943-1945

Details of the mutation R380del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2380R380delCGT---4545All0.000009
ORF1ab/nsp2380R380delCGT---1111B.1.1.70.00001
ORF1ab/nsp2380R380delCGT---33AY.4.50.000322
ORF1ab/nsp2380R380delCGT---33B.10.000027
ORF1ab/nsp2380R380delCGT---33B.1.1.330.001263
ORF1ab/nsp2380R380delCGT---33B.1.1.3480.002389
ORF1ab/nsp2380R380delCGT---22AY.40.000003
ORF1ab/nsp2380R380delCGT---22B.1.10.000036
ORF1ab/nsp2380R380delCGT---22B.1.1770.000026
ORF1ab/nsp2380R380delCGT---22B.1.4240.016129
ORF1ab/nsp2380R380delCGT---22N.60.014184
ORF1ab/nsp2380R380delCGT---22P.20.000373
ORF1ab/nsp2380R380delCGT---11AY.1110.000183
ORF1ab/nsp2380R380delCGT---11AY.250.000006
ORF1ab/nsp2380R380delCGT---11AY.75.10.00018
ORF1ab/nsp2380R380delCGT---11B.1.1.4160.000905
ORF1ab/nsp2380R380delCGT---11B.1.4290.000024
ORF1ab/nsp2380R380delCGT---11B.1.4390.005917
ORF1ab/nsp2380R380delCGT---11B.1.5610.000397
ORF1ab/nsp2380R380delCGT---11B.570.015152
ORF1ab/nsp2380R380delCGT---11P.10.000016
ORF1ab/nsp2380R380delCGT---11Q.10.000126