CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = R380Q

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2380R380QR560QnonsyncGTcAA950.5555561943-1945
ORF1ab/nsp2380R380QR560QnonsyncGTcAG940.4444441943-1945

Details of the mutation R380Q within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2380R380QcGTcAA59All0.000001
ORF1ab/nsp2380R380QcGTcAG49All0.000001
ORF1ab/nsp2380R380QcGTcAA23B.10.000018
ORF1ab/nsp2380R380QcGTcAG13B.10.000009
ORF1ab/nsp2380R380QcGTcAG12B.1.10.000018
ORF1ab/nsp2380R380QcGTcAA12B.1.10.000018
ORF1ab/nsp2380R380QcGTcAA12B.1.1770.000013
ORF1ab/nsp2380R380QcGTcAG12B.1.1770.000013
ORF1ab/nsp2380R380QcGTcAA12B.1.2210.000071
ORF1ab/nsp2380R380QcGTcAG12B.1.2210.000071