CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = R380I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2380R380IR560InonsynCGtATt52300.5769231943-1945
ORF1ab/nsp2380R380IR560InonsynCGTATA52190.3653851943-1945
ORF1ab/nsp2380R380IR560InonsynCGTATC5230.05769231943-1945

Details of the mutation R380I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2380R380ICGtATt3052All0.000006
ORF1ab/nsp2380R380ICGTATA1952All0.000004
ORF1ab/nsp2380R380ICGTATC352All0.000001
ORF1ab/nsp2380R380ICGtATt2136B.1.1.70.000019
ORF1ab/nsp2380R380ICGTATA1536B.1.1.70.000013
ORF1ab/nsp2380R380ICGtATt35B.10.000027
ORF1ab/nsp2380R380ICGTATA15B.10.000009
ORF1ab/nsp2380R380ICGTATC15B.10.000009
ORF1ab/nsp2380R380ICGtATt24B.1.2580.000133
ORF1ab/nsp2380R380ICGTATC24B.1.2580.000133
ORF1ab/nsp2380R380ICGtATt12B.1.1770.000013
ORF1ab/nsp2380R380ICGTATA12B.1.1770.000013
ORF1ab/nsp2380R380ICGTATA12B.1.2210.000071
ORF1ab/nsp2380R380ICGtATt12B.1.2210.000071
ORF1ab/nsp2380R380ICGtATt12P.10.000016
ORF1ab/nsp2380R380ICGTATA12P.10.000016
ORF1ab/nsp2380R380ICGtATt11B.1.10.000018