CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = R380G

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2380R380GR560GnonsynCgtGgt2471680.6801621943-1945
ORF1ab/nsp2380R380GR560GnonsynCgTGgG247370.1497981943-1945
ORF1ab/nsp2380R380GR560GnonsynCgTGgA247290.1174091943-1945
ORF1ab/nsp2380R380GR560GnonsynCgTGgC247130.05263161943-1945

Details of the mutation R380G within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2380R380GCgtGgt168247All0.000032
ORF1ab/nsp2380R380GCgTGgG37247All0.000007
ORF1ab/nsp2380R380GCgTGgA29247All0.000006
ORF1ab/nsp2380R380GCgTGgC13247All0.000002
ORF1ab/nsp2380R380GCgtGgt101135B.10.000925
ORF1ab/nsp2380R380GCgTGgG17135B.10.000156
ORF1ab/nsp2380R380GCgTGgC9135B.10.000082
ORF1ab/nsp2380R380GCgTGgA8135B.10.000073
ORF1ab/nsp2380R380GCgtGgt1847B.1.1.70.000016
ORF1ab/nsp2380R380GCgTGgA1647B.1.1.70.000014
ORF1ab/nsp2380R380GCgTGgG1147B.1.1.70.00001
ORF1ab/nsp2380R380GCgTGgC247B.1.1.70.000002
ORF1ab/nsp2380R380GCgtGgt1114B.1.10.0002
ORF1ab/nsp2380R380GCgTGgG214B.1.10.000036
ORF1ab/nsp2380R380GCgTGgA114B.1.10.000018
ORF1ab/nsp2380R380GCgtGgt1214B.1.1770.000158
ORF1ab/nsp2380R380GCgTGgA114B.1.1770.000013
ORF1ab/nsp2380R380GCgTGgG114B.1.1770.000013
ORF1ab/nsp2380R380GCgtGgt36B.1.2580.0002
ORF1ab/nsp2380R380GCgTGgC26B.1.2580.000133
ORF1ab/nsp2380R380GCgTGgG16B.1.2580.000067
ORF1ab/nsp2380R380GCgtGgt44B.1.1600.000125
ORF1ab/nsp2380R380GCgtGgt24B.1.2210.000142
ORF1ab/nsp2380R380GCgTGgA14B.1.2210.000071
ORF1ab/nsp2380R380GCgTGgG14B.1.2210.000071
ORF1ab/nsp2380R380GCgtGgt24B.1.6090.000959
ORF1ab/nsp2380R380GCgTGgA14B.1.6090.000479
ORF1ab/nsp2380R380GCgTGgG14B.1.6090.000479
ORF1ab/nsp2380R380GCgtGgt13B.1.1.10.000327
ORF1ab/nsp2380R380GCgTGgG13B.1.1.10.000327
ORF1ab/nsp2380R380GCgTGgA13B.1.1.10.000327
ORF1ab/nsp2380R380GCgtGgt23B.1.1.1700.002494
ORF1ab/nsp2380R380GCgTGgG13B.1.1.1700.001247
ORF1ab/nsp2380R380GCgTGgG12AY.250.000006
ORF1ab/nsp2380R380GCgtGgt12AY.250.000006
ORF1ab/nsp2380R380GCgtGgt22K.10.047619
ORF1ab/nsp2380R380GCgtGgt11B.1.1.1930.111111
ORF1ab/nsp2380R380GCgtGgt11B.1.1.3010.001179
ORF1ab/nsp2380R380GCgtGgt11B.1.1.390.00051
ORF1ab/nsp2380R380GCgtGgt11B.1.1.700.000341
ORF1ab/nsp2380R380GCgtGgt11B.1.1460.004237
ORF1ab/nsp2380R380GCgtGgt11B.1.177.750.001041
ORF1ab/nsp2380R380GCgtGgt11B.1.20.000009
ORF1ab/nsp2380R380GCgtGgt11B.1.2840.013158
ORF1ab/nsp2380R380GCgtGgt11B.1.780.008547