CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = Q496del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2496Q496del1Q676del1delcaGca-420.52291-2293
ORF1ab/nsp2496Q496del1Q676del1delcAgc-g410.252291-2293
ORF1ab/nsp2496Q496del1Q676del1delCaG-aC410.252291-2293

Details of the mutation Q496del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2496Q496del1caGca-24All0
ORF1ab/nsp2496Q496del1cAgc-g14All0
ORF1ab/nsp2496Q496del1CaG-aC14All0
ORF1ab/nsp2496Q496del1CaG-aC11AY.390.000025
ORF1ab/nsp2496Q496del1caGca-11B.1.1.70.000001
ORF1ab/nsp2496Q496del1cAgc-g11B.1.1130.015625
ORF1ab/nsp2496Q496del1caGca-11B.1.617.20.000004