CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = Q496P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2496Q496PQ676PnonsyncAgcCg303530300.9983532291-2293
ORF1ab/nsp2496Q496PQ676PnonsyncAGcCA303540.001317962291-2293
ORF1ab/nsp2496Q496PQ676PnonsyncAGcCT303510.0003294892291-2293

Details of the mutation Q496P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2496Q496PcAgcCg30303035All0.00058
ORF1ab/nsp2496Q496PcAGcCA43035All0.000001
ORF1ab/nsp2496Q496PcAGcCT13035All0
ORF1ab/nsp2496Q496PcAgcCg28752878AY.530.826624
ORF1ab/nsp2496Q496PcAGcCA22878AY.530.000575
ORF1ab/nsp2496Q496PcAGcCT12878AY.530.000288
ORF1ab/nsp2496Q496PcAgcCg5757B.1.1130.890625
ORF1ab/nsp2496Q496PcAgcCg3838AY.40.000059
ORF1ab/nsp2496Q496PcAgcCg1111B.1.617.20.000041
ORF1ab/nsp2496Q496PcAgcCg78B.10.000064
ORF1ab/nsp2496Q496PcAGcCA18B.10.000009
ORF1ab/nsp2496Q496PcAgcCg88B.1.2470.119403
ORF1ab/nsp2496Q496PcAgcCg66P.1.140.000287
ORF1ab/nsp2496Q496PcAgcCg33AY.430.000013
ORF1ab/nsp2496Q496PcAgcCg22A0.000774
ORF1ab/nsp2496Q496PcAgcCg22AY.610.00021
ORF1ab/nsp2496Q496PcAgcCg22AY.750.000112
ORF1ab/nsp2496Q496PcAgcCg22B.1.1.70.000002
ORF1ab/nsp2496Q496PcAgcCg22B.1.1430.042553
ORF1ab/nsp2496Q496PcAgcCg22B.1.20.000018
ORF1ab/nsp2496Q496PcAgcCg11AY.100.00053
ORF1ab/nsp2496Q496PcAgcCg11AY.1130.000142
ORF1ab/nsp2496Q496PcAgcCg11AY.1190.000035
ORF1ab/nsp2496Q496PcAgcCg11AY.130.000161
ORF1ab/nsp2496Q496PcAGcCA11AY.260.000028
ORF1ab/nsp2496Q496PcAgcCg11AY.300.000396
ORF1ab/nsp2496Q496PcAgcCg11AY.380.000499
ORF1ab/nsp2496Q496PcAgcCg11AY.420.00004
ORF1ab/nsp2496Q496PcAgcCg11AY.440.000006
ORF1ab/nsp2496Q496PcAgcCg11AY.470.000031
ORF1ab/nsp2496Q496PcAgcCg11AY.540.000095
ORF1ab/nsp2496Q496PcAgcCg11B.1.10.000018
ORF1ab/nsp2496Q496PcAgcCg11B.1.36.80.001
ORF1ab/nsp2496Q496PcAgcCg11B.1.6230.000536