CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = Q496K

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2496Q496KQ676KnonsynCagAag23220.9565222291-2293
ORF1ab/nsp2496Q496KQ676KnonsynCaGAaA2310.04347832291-2293

Details of the mutation Q496K within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2496Q496KCagAag2223All0.000004
ORF1ab/nsp2496Q496KCaGAaA123All0
ORF1ab/nsp2496Q496KCagAag99AY.40.000014
ORF1ab/nsp2496Q496KCagAag33AY.650.001599
ORF1ab/nsp2496Q496KCagAag22B.10.000018
ORF1ab/nsp2496Q496KCagAag22B.1.1.70.000002
ORF1ab/nsp2496Q496KCagAag110.055556
ORF1ab/nsp2496Q496KCagAag11AY.130.000161
ORF1ab/nsp2496Q496KCagAag11AY.30.00001
ORF1ab/nsp2496Q496KCaGAaA11AY.46.60.000072
ORF1ab/nsp2496Q496KCagAag11B.1.1.3340.016393
ORF1ab/nsp2496Q496KCagAag11B.1.3490.000715
ORF1ab/nsp2496Q496KCagAag11B.1.6340.003425