CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 624 | P624S | P804S | nonsyn | Cct | Tct | 4837 | 4834 | 0.99938 | 2675-2677 |
ORF1ab/nsp2 | 624 | P624S | P804S | nonsyn | CcT | TcA | 4837 | 2 | 0.000413479 | 2675-2677 |
ORF1ab/nsp2 | 624 | P624S | P804S | nonsyn | CCt | AGt | 4837 | 1 | 0.00020674 | 2675-2677 |
Details of the mutation P624S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4834 | 4837 | All | 0.000925 |
ORF1ab/nsp2 | 624 | P624S | CcT | TcA | 2 | 4837 | All | 0 |
ORF1ab/nsp2 | 624 | P624S | CCt | AGt | 1 | 4837 | All | 0 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1249 | 1249 | AY.4 | 0.001944 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1125 | 1125 | AY.43 | 0.004984 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 513 | 514 | B.1.1.7 | 0.000459 |
ORF1ab/nsp2 | 624 | P624S | CCt | AGt | 1 | 514 | B.1.1.7 | 0.000001 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 193 | 193 | B.1.2 | 0.001699 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 149 | 149 | AY.103 | 0.000925 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 149 | 149 | B.1.617.2 | 0.000561 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 114 | 114 | P.1 | 0.001796 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 102 | 102 | B.1.429 | 0.0024 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 67 | 67 | AY.44 | 0.000408 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 62 | 62 | AA.5 | 1 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 54 | 54 | AY.98 | 0.004266 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 49 | 49 | B.1.177 | 0.000645 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 44 | 44 | AY.39.1 | 0.001743 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 44 | 44 | B.1.1 | 0.000798 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 41 | 41 | B.1.427 | 0.00207 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 40 | 40 | AY.4.1 | 0.029499 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 37 | 37 | B.1.1.519 | 0.001469 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 36 | 36 | B.1.243 | 0.002505 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 30 | 30 | AY.25 | 0.00018 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 30 | 30 | B.1.1.500 | 0.6 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 29 | 29 | Q.1 | 0.003663 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 26 | 26 | P.1.14 | 0.001243 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 25 | 25 | B.1 | 0.000229 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 25 | 25 | B.1.36.17 | 0.012352 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 23 | 23 | AY.102 | 0.00061 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 22 | 22 | AY.3 | 0.000219 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 22 | 22 | AY.75 | 0.001232 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 21 | 21 | B.1.526 | 0.000494 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 19 | 19 | AY.90 | 0.013005 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 19 | 19 | B.1.1.277 | 0.014416 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 17 | 17 | AY.39 | 0.00042 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 15 | 15 | B.1.36.1 | 0.017104 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 13 | 13 | AY.23 | 0.000907 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 12 | 12 | AY.110 | 0.001352 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 12 | 12 | AY.42 | 0.000483 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 12 | 12 | B.1.160.26 | 0.029056 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 11 | 11 | AY.26 | 0.000311 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 11 | 11 | B.1.351 | 0.000327 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 10 | 10 | AY.29 | 0.000158 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 10 | 10 | B.1.36.18 | 0.004202 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 9 | 9 | AY.17 | 0.07377 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 8 | 8 | B.1.160 | 0.00025 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 7 | 7 | AY.113 | 0.000997 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 7 | 7 | AY.5 | 0.000145 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 7 | 7 | AY.98.1 | 0.000339 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 7 | 7 | B.1.1.204 | 0.021277 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 7 | 7 | B.1.258 | 0.000466 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | AY.4.5 | 0.000645 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | B.1.1.243 | 0.02449 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | B.1.36 | 0.000875 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 6 | 6 | B.1.620 | 0.005676 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 5 | 5 | AY.46.6 | 0.000361 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 5 | 5 | B.1.177.86 | 0.000917 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 5 | 5 | B.1.612 | 0.013263 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 5 | 5 | P.4 | 0.019011 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | AY.33 | 0.000267 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | AY.61 | 0.000419 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | B.1.223 | 0.011111 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | B.1.36.8 | 0.004 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | B.1.570 | 0.011765 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.14 | 0.000264 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.46.2 | 0.001906 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.64 | 0.001786 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.7.2 | 0.001678 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | AY.88 | 0.002653 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | B.1.1.214 | 0.000166 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | B.1.177.4 | 0.000633 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | B.1.239 | 0.003663 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | B.1.551 | 0.003871 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | B.1.621 | 0.000266 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 3 | 3 | C.16 | 0.003181 |
ORF1ab/nsp2 | 624 | P624S | CcT | TcA | 2 | 2 | 0.111111 | |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | A.2.5 | 0.000998 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.104 | 0.003968 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.36 | 0.000296 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.4.4 | 0.000818 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.73 | 0.001331 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.9 | 0.000135 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.9.2 | 0.000073 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | AY.91 | 0.001461 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.1.308 | 0.023529 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.1.311 | 0.000716 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.1.33 | 0.000842 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.177.35 | 0.001382 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.177.42 | 0.001789 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.177.56 | 0.001335 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.234 | 0.000264 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.356 | 0.003454 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.36.29 | 0.001035 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.530 | 0.014286 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.555 | 0.044444 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.588 | 0.00182 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.1.596 | 0.000174 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | B.4 | 0.004415 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 2 | 2 | P.2 | 0.000373 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AE.8 | 0.000489 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AM.4 | 0.003571 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AU.3 | 0.00211 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.39.2 | 0.001541 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.5.4 | 0.000277 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.89 | 0.004902 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | AY.99.2 | 0.000092 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.194 | 0.00495 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.232 | 0.001815 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.286 | 0.002899 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.315 | 0.008475 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.34 | 0.013158 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.523 | 0.001563 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.160.14 | 0.002119 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.12 | 0.000152 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.53 | 0.002392 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.177.85 | 0.005435 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.351.3 | 0.000876 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.36.25 | 0.002208 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.390 | 0.010638 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.428.3 | 0.012821 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.438 | 0.006536 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.487 | 0.019608 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.499 | 0.00105 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.513 | 0.013889 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.596.1 | 0.009346 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.610 | 0.003546 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | P.1.6 | 0.001946 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | P.1.8 | 0.004785 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp2 | 624 | P624S | Cct | Tct | 1 | 1 | U.3 | 0.003861 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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