CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = P624L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2624P624LP804LnonsyncCtcTt2893289312675-2677

Details of the mutation P624L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2624P624LcCtcTt28932893All0.000553
ORF1ab/nsp2624P624LcCtcTt781781AU.10.988608
ORF1ab/nsp2624P624LcCtcTt393393B.1.1.70.000352
ORF1ab/nsp2624P624LcCtcTt106106AY.40.000165
ORF1ab/nsp2624P624LcCtcTt9090B.1.6210.007967
ORF1ab/nsp2624P624LcCtcTt8787B.1.1.3740.206651
ORF1ab/nsp2624P624LcCtcTt7171B.1.10.001288
ORF1ab/nsp2624P624LcCtcTt7070B.1.20.000616
ORF1ab/nsp2624P624LcCtcTt6565AY.110.087015
ORF1ab/nsp2624P624LcCtcTt6262B.1.617.20.000233
ORF1ab/nsp2624P624LcCtcTt6161AY.1030.000379
ORF1ab/nsp2624P624LcCtcTt5454AY.430.000239
ORF1ab/nsp2624P624LcCtcTt5151B.10.000467
ORF1ab/nsp2624P624LcCtcTt4949AY.250.000295
ORF1ab/nsp2624P624LcCtcTt4949B.1.36.180.020588
ORF1ab/nsp2624P624LcCtcTt4646Q.40.020919
ORF1ab/nsp2624P624LcCtcTt4141B.1.1.4480.083333
ORF1ab/nsp2624P624LcCtcTt4141B.1.351.50.02458
ORF1ab/nsp2624P624LcCtcTt3939A0.015093
ORF1ab/nsp2624P624LcCtcTt3636AY.390.00089
ORF1ab/nsp2624P624LcCtcTt3030AY.30.000298
ORF1ab/nsp2624P624LcCtcTt2828B.1.1770.000369
ORF1ab/nsp2624P624LcCtcTt2424P.10.000378
ORF1ab/nsp2624P624LcCtcTt2323B.1.1.2220.004692
ORF1ab/nsp2624P624LcCtcTt1919B.1.177.390.292308
ORF1ab/nsp2624P624LcCtcTt1919B.1.5960.001656
ORF1ab/nsp2624P624LcCtcTt1717B.1.1390.012463
ORF1ab/nsp2624P624LcCtcTt1616P.20.002986
ORF1ab/nsp2624P624LcCtcTt1414AY.1020.000371
ORF1ab/nsp2624P624LcCtcTt1414B.1.5170.005978
ORF1ab/nsp2624P624LcCtcTt1313AY.260.000368
ORF1ab/nsp2624P624LcCtcTt1212B.1.3510.000357
ORF1ab/nsp2624P624LcCtcTt1212B.1.5880.010919
ORF1ab/nsp2624P624LcCtcTt1111AY.1180.000689
ORF1ab/nsp2624P624LcCtcTt1111AY.39.10.000436
ORF1ab/nsp2624P624LcCtcTt1111AY.440.000067
ORF1ab/nsp2624P624LcCtcTt1111AY.470.000342
ORF1ab/nsp2624P624LcCtcTt1010B.1.1600.000312
ORF1ab/nsp2624P624LcCtcTt1010B.1.5260.000235
ORF1ab/nsp2624P624LcCtcTt99AY.5.40.00249
ORF1ab/nsp2624P624LcCtcTt99AY.9.20.000331
ORF1ab/nsp2624P624LcCtcTt99B.1.3750.007377
ORF1ab/nsp2624P624LcCtcTt88AY.1000.000368
ORF1ab/nsp2624P624LcCtcTt88AY.290.000126
ORF1ab/nsp2624P624LcCtcTt88B.1.466.20.00313
ORF1ab/nsp2624P624LcCtcTt88B.1.6370.000585
ORF1ab/nsp2624P624LcCtcTt77AY.50.000145
ORF1ab/nsp2624P624LcCtcTt77AY.99.20.000645
ORF1ab/nsp2624P624LcCtcTt77B.1.1.2530.017544
ORF1ab/nsp2624P624LcCtcTt77B.1.177.210.000535
ORF1ab/nsp2624P624LcCtcTt77B.1.3980.020833
ORF1ab/nsp2624P624LcCtcTt77Q.30.001015
ORF1ab/nsp2624P624LcCtcTt66AY.4.20.00013
ORF1ab/nsp2624P624LcCtcTt66AY.750.000336
ORF1ab/nsp2624P624LcCtcTt66AY.98.10.000291
ORF1ab/nsp2624P624LcCtcTt66B.1.1.280.001867
ORF1ab/nsp2624P624LcCtcTt66B.1.1.5190.000238
ORF1ab/nsp2624P624LcCtcTt66B.1.177.40.001266
ORF1ab/nsp2624P624LcCtcTt66B.1.2400.001293
ORF1ab/nsp2624P624LcCtcTt66B.1.4290.000141
ORF1ab/nsp2624P624LcCtcTt66P.1.10.001906
ORF1ab/nsp2624P624LcCtcTt55AY.7.10.000564
ORF1ab/nsp2624P624LcCtcTt55B.1.1.370.000964
ORF1ab/nsp2624P624LcCtcTt55B.1.2600.016722
ORF1ab/nsp2624P624LcCtcTt55B.1.36.290.002587
ORF1ab/nsp2624P624LcCtcTt55B.1.4270.000252
ORF1ab/nsp2624P624LcCtcTt55P.1.140.000239
ORF1ab/nsp2624P624LcCtcTt44AY.100.00212
ORF1ab/nsp2624P624LcCtcTt44AY.1070.001864
ORF1ab/nsp2624P624LcCtcTt44AY.690.000747
ORF1ab/nsp2624P624LcCtcTt44B.1.1.2140.000222
ORF1ab/nsp2624P624LcCtcTt44B.1.1280.002541
ORF1ab/nsp2624P624LcCtcTt44B.1.2430.000278
ORF1ab/nsp2624P624LcCtcTt44B.1.2580.000266
ORF1ab/nsp2624P624LcCtcTt44B.1.5640.001704
ORF1ab/nsp2624P624LcCtcTt33AY.1170.000254
ORF1ab/nsp2624P624LcCtcTt33AY.1200.000112
ORF1ab/nsp2624P624LcCtcTt33AY.370.000948
ORF1ab/nsp2624P624LcCtcTt33AY.420.000121
ORF1ab/nsp2624P624LcCtcTt33AY.610.000314
ORF1ab/nsp2624P624LcCtcTt33AY.740.000347
ORF1ab/nsp2624P624LcCtcTt33AY.90.000203
ORF1ab/nsp2624P624LcCtcTt33B0.000383
ORF1ab/nsp2624P624LcCtcTt33B.1.1.3110.001074
ORF1ab/nsp2624P624LcCtcTt33B.1.1.3480.002389
ORF1ab/nsp2624P624LcCtcTt33B.1.1110.003525
ORF1ab/nsp2624P624LcCtcTt33B.1.177.870.002183
ORF1ab/nsp2624P624LcCtcTt33B.1.2210.000213
ORF1ab/nsp2624P624LcCtcTt33B.1.2340.000396
ORF1ab/nsp2624P624LcCtcTt33B.1.3060.017143
ORF1ab/nsp2624P624LcCtcTt33B.1.6230.001609
ORF1ab/nsp2624P624LcCtcTt33C.370.000348
ORF1ab/nsp2624P624LcCtcTt33D.20.000225
ORF1ab/nsp2624P624LcCtcTt33P.1.150.000697
ORF1ab/nsp2624P624LcCtcTt22A.50.003846
ORF1ab/nsp2624P624LcCtcTt22AY.1190.000071
ORF1ab/nsp2624P624LcCtcTt22AY.190.002281
ORF1ab/nsp2624P624LcCtcTt22AY.200.000078
ORF1ab/nsp2624P624LcCtcTt22AY.3.10.000171
ORF1ab/nsp2624P624LcCtcTt22AY.450.000243
ORF1ab/nsp2624P624LcCtcTt22AY.9.10.000167
ORF1ab/nsp2624P624LcCtcTt22AY.920.000575
ORF1ab/nsp2624P624LcCtcTt22B.1.1.2070.002364
ORF1ab/nsp2624P624LcCtcTt22B.1.1.3120.003824
ORF1ab/nsp2624P624LcCtcTt22B.1.1.3260.003521
ORF1ab/nsp2624P624LcCtcTt22B.1.1.4620.017241
ORF1ab/nsp2624P624LcCtcTt22B.1.36.80.002
ORF1ab/nsp2624P624LcCtcTt22B.1.438.10.000215
ORF1ab/nsp2624P624LcCtcTt22B.1.4590.008163
ORF1ab/nsp2624P624LcCtcTt22B.1.5250.000226
ORF1ab/nsp2624P624LcCtcTt22B.1.5400.019417
ORF1ab/nsp2624P624LcCtcTt22B.1.5770.001375
ORF1ab/nsp2624P624LcCtcTt22B.1.5950.000522
ORF1ab/nsp2624P624LcCtcTt22B.1.617.10.000258
ORF1ab/nsp2624P624LcCtcTt22P.1.100.000539
ORF1ab/nsp2624P624LcCtcTt22Q.10.000253
ORF1ab/nsp2624P624LcCtcTt11A.20.000662
ORF1ab/nsp2624P624LcCtcTt11A.60.005128
ORF1ab/nsp2624P624LcCtcTt11AU.20.002421
ORF1ab/nsp2624P624LcCtcTt11AW.10.003049
ORF1ab/nsp2624P624LcCtcTt11AY.1100.000113
ORF1ab/nsp2624P624LcCtcTt11AY.1110.000183
ORF1ab/nsp2624P624LcCtcTt11AY.1130.000142
ORF1ab/nsp2624P624LcCtcTt11AY.120.2.10.000498
ORF1ab/nsp2624P624LcCtcTt11AY.1210.000135
ORF1ab/nsp2624P624LcCtcTt11AY.130.000161
ORF1ab/nsp2624P624LcCtcTt11AY.140.000088
ORF1ab/nsp2624P624LcCtcTt11AY.160.00038
ORF1ab/nsp2624P624LcCtcTt11AY.16.10.00047
ORF1ab/nsp2624P624LcCtcTt11AY.270.000065
ORF1ab/nsp2624P624LcCtcTt11AY.330.000067
ORF1ab/nsp2624P624LcCtcTt11AY.340.000097
ORF1ab/nsp2624P624LcCtcTt11AY.360.000148
ORF1ab/nsp2624P624LcCtcTt11AY.400.000964
ORF1ab/nsp2624P624LcCtcTt11AY.410.000294
ORF1ab/nsp2624P624LcCtcTt11AY.46.10.001027
ORF1ab/nsp2624P624LcCtcTt11AY.46.40.000165
ORF1ab/nsp2624P624LcCtcTt11AY.5.30.000337
ORF1ab/nsp2624P624LcCtcTt11AY.510.000909
ORF1ab/nsp2624P624LcCtcTt11AY.550.000917
ORF1ab/nsp2624P624LcCtcTt11AY.580.000907
ORF1ab/nsp2624P624LcCtcTt11AY.590.00053
ORF1ab/nsp2624P624LcCtcTt11AY.60.000041
ORF1ab/nsp2624P624LcCtcTt11AY.720.001361
ORF1ab/nsp2624P624LcCtcTt11AY.75.10.00018
ORF1ab/nsp2624P624LcCtcTt11AY.780.001541
ORF1ab/nsp2624P624LcCtcTt11AY.820.001357
ORF1ab/nsp2624P624LcCtcTt11AY.910.00073
ORF1ab/nsp2624P624LcCtcTt11AY.980.000079
ORF1ab/nsp2624P624LcCtcTt11AZ.50.003509
ORF1ab/nsp2624P624LcCtcTt11B.1.1.1350.004695
ORF1ab/nsp2624P624LcCtcTt11B.1.1.1610.003534
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2200.001859
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2540.011236
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2610.008621
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2630.001558
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2650.003155
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2730.006757
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2770.000759
ORF1ab/nsp2624P624LcCtcTt11B.1.1.2840.000107
ORF1ab/nsp2624P624LcCtcTt11B.1.1.3060.000438
ORF1ab/nsp2624P624LcCtcTt11B.1.1.3170.000412
ORF1ab/nsp2624P624LcCtcTt11B.1.1.330.000421
ORF1ab/nsp2624P624LcCtcTt11B.1.1.3720.000689
ORF1ab/nsp2624P624LcCtcTt11B.1.1.3890.006061
ORF1ab/nsp2624P624LcCtcTt11B.1.1.3980.003226
ORF1ab/nsp2624P624LcCtcTt11B.1.1.4170.002703
ORF1ab/nsp2624P624LcCtcTt11B.1.1.4200.001006
ORF1ab/nsp2624P624LcCtcTt11B.1.1.4350.034483
ORF1ab/nsp2624P624LcCtcTt11B.1.1.560.017857
ORF1ab/nsp2624P624LcCtcTt11B.1.1.610.008772
ORF1ab/nsp2624P624LcCtcTt11B.1.160.300.002976
ORF1ab/nsp2624P624LcCtcTt11B.1.177.70.000165
ORF1ab/nsp2624P624LcCtcTt11B.1.177.80.000752
ORF1ab/nsp2624P624LcCtcTt11B.1.2220.001692
ORF1ab/nsp2624P624LcCtcTt11B.1.2370.004975
ORF1ab/nsp2624P624LcCtcTt11B.1.3150.006061
ORF1ab/nsp2624P624LcCtcTt11B.1.3480.018182
ORF1ab/nsp2624P624LcCtcTt11B.1.351.20.000303
ORF1ab/nsp2624P624LcCtcTt11B.1.36.100.004785
ORF1ab/nsp2624P624LcCtcTt11B.1.3620.001541
ORF1ab/nsp2624P624LcCtcTt11B.1.3630.012987
ORF1ab/nsp2624P624LcCtcTt11B.1.3910.001127
ORF1ab/nsp2624P624LcCtcTt11B.1.4350.011364
ORF1ab/nsp2624P624LcCtcTt11B.1.4620.007246
ORF1ab/nsp2624P624LcCtcTt11B.1.4990.00105
ORF1ab/nsp2624P624LcCtcTt11B.1.5610.000397
ORF1ab/nsp2624P624LcCtcTt11B.1.5750.000303
ORF1ab/nsp2624P624LcCtcTt11B.1.5800.004065
ORF1ab/nsp2624P624LcCtcTt11B.3.10.001658
ORF1ab/nsp2624P624LcCtcTt11B.550.00295
ORF1ab/nsp2624P624LcCtcTt11B.580.010204
ORF1ab/nsp2624P624LcCtcTt11N.50.001767
ORF1ab/nsp2624P624LcCtcTt11R.10.00009