CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 568 | P568L | P748L | nonsyn | cCc | cTc | 4824 | 4472 | 0.927032 | 2507-2509 |
ORF1ab/nsp2 | 568 | P568L | P748L | nonsyn | cCC | cTG | 4824 | 342 | 0.0708955 | 2507-2509 |
ORF1ab/nsp2 | 568 | P568L | P748L | nonsyn | cCC | cTT | 4824 | 10 | 0.00207297 | 2507-2509 |
Details of the mutation P568L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4472 | 4824 | All | 0.000855 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 342 | 4824 | All | 0.000065 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 10 | 4824 | All | 0.000002 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1203 | 1206 | AY.4 | 0.001872 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 2 | 1206 | AY.4 | 0.000003 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 1206 | AY.4 | 0.000002 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 748 | 757 | B.1.1.7 | 0.00067 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 9 | 757 | B.1.1.7 | 0.000008 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 307 | 313 | B.1.617.2 | 0.001156 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 6 | 313 | B.1.617.2 | 0.000023 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 277 | 283 | AY.117 | 0.023411 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 283 | AY.117 | 0.000507 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 188 | 191 | AY.25 | 0.001131 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 3 | 191 | AY.25 | 0.000018 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 153 | 156 | AY.103 | 0.00095 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 3 | 156 | AY.103 | 0.000019 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 153 | 153 | AY.42 | 0.006155 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 151 | 152 | AY.43 | 0.000669 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 152 | AY.43 | 0.000004 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 149 | 149 | AY.100 | 0.006855 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 125 | 129 | B.1 | 0.001145 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 4 | 129 | B.1 | 0.000037 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 96 | 103 | B.1.2 | 0.000845 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 7 | 103 | B.1.2 | 0.000062 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 58 | 59 | AY.3 | 0.000577 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 59 | AY.3 | 0.00001 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 59 | 59 | P.1 | 0.000929 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 52 | 57 | B.1.1 | 0.000943 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 5 | 57 | B.1.1 | 0.000091 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 56 | 56 | AY.46.4 | 0.009212 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 55 | 55 | A.15 | 0.873016 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 40 | 51 | AY.44 | 0.000243 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 11 | 51 | AY.44 | 0.000067 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 47 | 50 | B.1.429 | 0.001106 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 3 | 50 | B.1.429 | 0.000071 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 44 | 45 | B.1.596 | 0.003834 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 45 | B.1.596 | 0.000087 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 34 | 34 | P.1.14 | 0.001625 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 32 | 32 | B.1.526 | 0.000752 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 31 | 31 | AY.39.1 | 0.001228 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 30 | 30 | AY.29 | 0.000473 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 29 | 29 | AY.111 | 0.005311 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 24 | 24 | B.1.177 | 0.000316 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 22 | 22 | B.1.1.214 | 0.00122 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 18 | 18 | AY.47 | 0.00056 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 17 | 17 | B.1.177.4 | 0.003588 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 16 | 16 | AY.107 | 0.007456 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 14 | 16 | B.1.243 | 0.000974 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 2 | 16 | B.1.243 | 0.000139 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 16 | 16 | B.1.379 | 0.275862 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 15 | 15 | AY.46 | 0.001561 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 14 | 14 | AY.46.6 | 0.001011 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 14 | 14 | AY.61 | 0.001467 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 12 | 12 | AY.39 | 0.000297 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 11 | 11 | B | 0.001406 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 11 | 11 | B.1.177.54 | 0.006671 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 10 | 10 | AY.88 | 0.008842 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 10 | 10 | B.1.258 | 0.000665 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 9 | AY.26 | 0.000198 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 2 | 9 | AY.26 | 0.000057 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 9 | 9 | B.1.1.432 | 0.011392 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 9 | 9 | B.1.236 | 0.01848 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 9 | 9 | B.1.351 | 0.000268 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 8 | 8 | B.1.582 | 0.003925 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 7 | AY.20 | 0.000233 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 7 | AY.20 | 0.000039 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | AY.34 | 0.000679 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | B.1.177.32 | 0.009447 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 7 | 7 | B.1.621 | 0.00062 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.102 | 0.000159 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.23.1 | 0.002504 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.4.2 | 0.00013 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.5 | 0.000124 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.9 | 0.000406 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | AY.98.1 | 0.000291 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | B.1.1.222 | 0.001224 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | B.1.160 | 0.000187 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | B.1.221 | 0.000426 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | P.1.13 | 0.005391 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 6 | 6 | Q.8 | 0.000989 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.1.519 | 0.000199 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.258.17 | 0.00052 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.36 | 0.00073 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.36.29 | 0.002587 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.575.1 | 0.012195 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.628 | 0.001762 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.116 | 0.001147 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.12 | 0.001264 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.68 | 0.001095 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.70 | 0.000834 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.75 | 0.000224 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | AY.98 | 0.000316 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | B.1.505 | 0.017544 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | B.1.621.1 | 0.002023 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 4 | P.1.17 | 0.000485 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 4 | P.1.17 | 0.000162 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 4 | 4 | P.2 | 0.000747 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | AY.23 | 0.000209 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.1.371 | 0.03125 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.1.70 | 0.001023 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.177.10 | 0.002634 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 2 | 3 | B.1.177.21 | 0.000153 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 3 | B.1.177.21 | 0.000076 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.177.7 | 0.000495 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.221.2 | 0.012048 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | B.1.617.1 | 0.000387 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.16.1 | 0.00094 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.35 | 0.000466 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.41 | 0.000588 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.53 | 0.000575 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.6 | 0.000082 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.62 | 0.000871 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 2 | 2 | AY.72 | 0.002721 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.1.326 | 0.003521 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.177.52 | 0.003515 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.177.57 | 0.000562 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.177.60 | 0.000437 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.177.75 | 0.002081 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.214.1 | 0.04 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.333 | 0.021053 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.409 | 0.001563 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | B.3 | 0.001661 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | C.35 | 0.001548 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | P.7 | 0.008734 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 2 | 2 | R.1 | 0.00018 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AJ.1 | 0.045455 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.1 | 0.000396 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.22 | 0.002092 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.4.1 | 0.000737 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.8 | 0.000606 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | AY.92 | 0.000287 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.181 | 0.004545 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.192 | 0.002309 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.284 | 0.000107 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.312 | 0.001912 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.351 | 0.002793 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.433 | 0.001425 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.1.486 | 0.001577 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.160.15 | 0.00495 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.67 | 0.007634 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.73 | 0.000566 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.222 | 0.001692 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.232 | 0.000537 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.258.11 | 0.000396 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.302 | 0.013333 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.337 | 0.005587 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.525 | 0.000113 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.551 | 0.00129 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.576 | 0.000907 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.1.88.1 | 0.004808 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.40 | 0.000364 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTT | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp2 | 568 | P568L | cCc | cTc | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp2 | 568 | P568L | cCC | cTG | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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