CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = P125P

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2125P125PP305PsynccAccG440942470.9632571178-1180
ORF1ab/nsp2125P125PP305PsynccAccT44091360.0308461178-1180
ORF1ab/nsp2125P125PP305PsynccAccC4409260.005897031178-1180

Details of the mutation P125P within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2125P125PccAccG42474409All0.000812
ORF1ab/nsp2125P125PccAccT1364409All0.000026
ORF1ab/nsp2125P125PccAccC264409All0.000005
ORF1ab/nsp2125P125PccAccG30883092B.1.5750.936893
ORF1ab/nsp2125P125PccAccT43092B.1.5750.001214
ORF1ab/nsp2125P125PccAccG395395B.1.575.10.963415
ORF1ab/nsp2125P125PccAccG207208B.1.575.20.995192
ORF1ab/nsp2125P125PccAccT1208B.1.575.20.004808
ORF1ab/nsp2125P125PccAccG203205AY.250.001221
ORF1ab/nsp2125P125PccAccT2205AY.250.000012
ORF1ab/nsp2125P125PccAccG104118B.1.1.70.000093
ORF1ab/nsp2125P125PccAccT9118B.1.1.70.000008
ORF1ab/nsp2125P125PccAccC5118B.1.1.70.000004
ORF1ab/nsp2125P125PccAccG4850B.10.00044
ORF1ab/nsp2125P125PccAccT250B.10.000018
ORF1ab/nsp2125P125PccAccT2847AY.1030.000174
ORF1ab/nsp2125P125PccAccG1947AY.1030.000118
ORF1ab/nsp2125P125PccAccG3542AY.40.000054
ORF1ab/nsp2125P125PccAccT442AY.40.000006
ORF1ab/nsp2125P125PccAccC342AY.40.000005
ORF1ab/nsp2125P125PccAccT2634P.10.00041
ORF1ab/nsp2125P125PccAccG834P.10.000126
ORF1ab/nsp2125P125PccAccT3132B.1.20.000273
ORF1ab/nsp2125P125PccAccG132B.1.20.000009
ORF1ab/nsp2125P125PccAccG2525B.1.4270.001262
ORF1ab/nsp2125P125PccAccG2222B.1.5950.005741
ORF1ab/nsp2125P125PccAccG1922B.1.617.20.000072
ORF1ab/nsp2125P125PccAccT322B.1.617.20.000011
ORF1ab/nsp2125P125PccAccT1116AY.430.000049
ORF1ab/nsp2125P125PccAccG416AY.430.000018
ORF1ab/nsp2125P125PccAccC116AY.430.000004
ORF1ab/nsp2125P125PccAccG77AY.440.000043
ORF1ab/nsp2125P125PccAccT45AY.130.000644
ORF1ab/nsp2125P125PccAccG15AY.130.000161
ORF1ab/nsp2125P125PccAccG44AY.30.00004
ORF1ab/nsp2125P125PccAccG24AY.470.000062
ORF1ab/nsp2125P125PccAccC24AY.470.000062
ORF1ab/nsp2125P125PccAccT24B.1.10.000036
ORF1ab/nsp2125P125PccAccG24B.1.10.000036
ORF1ab/nsp2125P125PccAccG44B.1.1770.000053
ORF1ab/nsp2125P125PccAccC44B.1.5820.001963
ORF1ab/nsp2125P125PccAccG33AY.1170.000254
ORF1ab/nsp2125P125PccAccG33AY.260.000085
ORF1ab/nsp2125P125PccAccC33AY.290.000047
ORF1ab/nsp2125P125PccAccG33AY.98.10.000145
ORF1ab/nsp2125P125PccAccG33B.1.1.280.000934
ORF1ab/nsp2125P125PccAccT33B.1.110.30.002155
ORF1ab/nsp2125P125PccAccG22AY.1000.000092
ORF1ab/nsp2125P125PccAccG22AY.150.004444
ORF1ab/nsp2125P125PccAccG22AY.360.000296
ORF1ab/nsp2125P125PccAccG22AY.390.000049
ORF1ab/nsp2125P125PccAccG22AY.620.000871
ORF1ab/nsp2125P125PccAccC22B.1.1.2140.000111
ORF1ab/nsp2125P125PccAccG22B.1.177.730.001133
ORF1ab/nsp2125P125PccAccG22B.1.177.860.000367
ORF1ab/nsp2125P125PccAccC12B.1.2340.000132
ORF1ab/nsp2125P125PccAccG12B.1.2340.000132
ORF1ab/nsp2125P125PccAccG22B.1.360.000292
ORF1ab/nsp2125P125PccAccG22B.1.466.20.000782
ORF1ab/nsp2125P125PccAccG22B.1.5170.000854
ORF1ab/nsp2125P125PccAccC22N.40.008511
ORF1ab/nsp2125P125PccAccG11AY.100.00053
ORF1ab/nsp2125P125PccAccG11AY.1050.000643
ORF1ab/nsp2125P125PccAccG11AY.1130.000142
ORF1ab/nsp2125P125PccAccT11AY.16.10.00047
ORF1ab/nsp2125P125PccAccC11AY.200.000039
ORF1ab/nsp2125P125PccAccG11AY.3.10.000085
ORF1ab/nsp2125P125PccAccT11AY.460.000104
ORF1ab/nsp2125P125PccAccC11AY.50.000021
ORF1ab/nsp2125P125PccAccG11AY.710.000475
ORF1ab/nsp2125P125PccAccG11AY.860.00083
ORF1ab/nsp2125P125PccAccG11AY.9.20.000037
ORF1ab/nsp2125P125PccAccG11AZ.30.00152
ORF1ab/nsp2125P125PccAccG11B.1.1.3180.000302
ORF1ab/nsp2125P125PccAccT11B.1.1.330.000421
ORF1ab/nsp2125P125PccAccT11B.1.1600.000031
ORF1ab/nsp2125P125PccAccT11B.1.177.70.000165
ORF1ab/nsp2125P125PccAccG11B.1.3670.000792
ORF1ab/nsp2125P125PccAccG11B.1.4000.000429
ORF1ab/nsp2125P125PccAccG11B.1.4290.000024
ORF1ab/nsp2125P125PccAccG11B.1.5880.00091
ORF1ab/nsp2125P125PccAccG11B.1.6230.000536
ORF1ab/nsp2125P125PccAccG11B.1.6280.000352
ORF1ab/nsp2125P125PccAccT11P.1.130.000898
ORF1ab/nsp2125P125PccAccG11P.1.70.000319
ORF1ab/nsp2125P125PccAccC11P.40.003802