CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = P106L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2106P106LP286LnonsyncCacTa159115860.9968571121-1123
ORF1ab/nsp2106P106LP286LnonsynCCaTTa159130.001885611121-1123
ORF1ab/nsp2106P106LP286LnonsyncCAcTT159120.001257071121-1123

Details of the mutation P106L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2106P106LcCacTa15861591All0.000303
ORF1ab/nsp2106P106LCCaTTa31591All0.000001
ORF1ab/nsp2106P106LcCAcTT21591All0
ORF1ab/nsp2106P106LcCacTa599599A.270.991722
ORF1ab/nsp2106P106LcCacTa463463B.1.36.211
ORF1ab/nsp2106P106LcCacTa7272AY.40.000112
ORF1ab/nsp2106P106LcCacTa5858B.1.1.70.000052
ORF1ab/nsp2106P106LcCacTa3232AY.99.20.002949
ORF1ab/nsp2106P106LcCacTa2828AY.250.000168
ORF1ab/nsp2106P106LcCacTa2728B.1.617.20.000102
ORF1ab/nsp2106P106LCCaTTa128B.1.617.20.000004
ORF1ab/nsp2106P106LcCacTa2323AY.98.10.001114
ORF1ab/nsp2106P106LcCacTa2222B.1.4290.000518
ORF1ab/nsp2106P106LcCacTa2121B.10.000192
ORF1ab/nsp2106P106LcCacTa1414AY.200.000544
ORF1ab/nsp2106P106LcCacTa1314AY.440.000079
ORF1ab/nsp2106P106LcCAcTT114AY.440.000006
ORF1ab/nsp2106P106LcCacTa1414B.1.1770.000184
ORF1ab/nsp2106P106LcCacTa1313A0.005031
ORF1ab/nsp2106P106LcCacTa1212AY.430.000053
ORF1ab/nsp2106P106LcCacTa1010B.1.1.5170.068027
ORF1ab/nsp2106P106LcCacTa1010B.1.1.5190.000397
ORF1ab/nsp2106P106LcCacTa99AZ.10.007806
ORF1ab/nsp2106P106LcCacTa88B0.001022
ORF1ab/nsp2106P106LcCacTa88C.1.20.034043
ORF1ab/nsp2106P106LcCacTa88P.10.000126
ORF1ab/nsp2106P106LcCacTa77AY.390.000173
ORF1ab/nsp2106P106LcCacTa77AY.640.004167
ORF1ab/nsp2106P106LcCacTa77B.1.20.000062
ORF1ab/nsp2106P106LcCacTa77B.1.6210.00062
ORF1ab/nsp2106P106LcCacTa55AY.30.00005
ORF1ab/nsp2106P106LcCacTa55B.1.5580.022831
ORF1ab/nsp2106P106LcCacTa44AY.1030.000025
ORF1ab/nsp2106P106LcCacTa44B.1.1600.000125
ORF1ab/nsp2106P106LcCacTa33A.290.015957
ORF1ab/nsp2106P106LcCacTa33AY.1190.000106
ORF1ab/nsp2106P106LcCacTa33AY.300.001187
ORF1ab/nsp2106P106LcCacTa33B.1.10.000054
ORF1ab/nsp2106P106LcCacTa33B.1.2210.000213
ORF1ab/nsp2106P106LcCacTa33B.1.3960.002117
ORF1ab/nsp2106P106LcCacTa33B.1.4200.03125
ORF1ab/nsp2106P106LCCaTTa220.111111
ORF1ab/nsp2106P106LcCacTa22AY.1020.000053
ORF1ab/nsp2106P106LcCacTa22AY.260.000057
ORF1ab/nsp2106P106LcCacTa22AY.39.10.000079
ORF1ab/nsp2106P106LcCacTa22AY.4.50.000215
ORF1ab/nsp2106P106LcCacTa22AY.420.00008
ORF1ab/nsp2106P106LcCacTa22AY.5.30.000675
ORF1ab/nsp2106P106LcCacTa22B.1.1.1410.004024
ORF1ab/nsp2106P106LcCacTa22B.1.1.2140.000111
ORF1ab/nsp2106P106LcCacTa22B.1.2320.001075
ORF1ab/nsp2106P106LcCacTa22B.1.2580.000133
ORF1ab/nsp2106P106LcCacTa22B.1.3670.001585
ORF1ab/nsp2106P106LcCacTa22B.1.5260.000047
ORF1ab/nsp2106P106LcCacTa22C.360.001821
ORF1ab/nsp2106P106LcCacTa22C.36.3.10.005435
ORF1ab/nsp2106P106LcCacTa11A.10.000282
ORF1ab/nsp2106P106LcCacTa11A.20.000662
ORF1ab/nsp2106P106LcCacTa11AY.10.000396
ORF1ab/nsp2106P106LcCacTa11AY.1200.000037
ORF1ab/nsp2106P106LcCacTa11AY.1210.000135
ORF1ab/nsp2106P106LcCacTa11AY.130.000161
ORF1ab/nsp2106P106LcCacTa11AY.450.000122
ORF1ab/nsp2106P106LcCacTa11AY.460.000104
ORF1ab/nsp2106P106LcCacTa11AY.540.000095
ORF1ab/nsp2106P106LcCAcTT11AY.990.001049
ORF1ab/nsp2106P106LcCacTa11B.1.1.1610.003534
ORF1ab/nsp2106P106LcCacTa11B.1.1.250.000569
ORF1ab/nsp2106P106LcCacTa11B.1.1.2860.002899
ORF1ab/nsp2106P106LcCacTa11B.1.1.3010.001179
ORF1ab/nsp2106P106LcCacTa11B.1.1.3170.000412
ORF1ab/nsp2106P106LcCacTa11B.1.160.330.004425
ORF1ab/nsp2106P106LcCacTa11B.1.2650.001271
ORF1ab/nsp2106P106LcCacTa11B.1.2800.007143
ORF1ab/nsp2106P106LcCacTa11B.1.3510.00003
ORF1ab/nsp2106P106LcCacTa11B.1.3690.000285
ORF1ab/nsp2106P106LcCacTa11B.1.4270.00005
ORF1ab/nsp2106P106LcCacTa11B.1.5640.000426
ORF1ab/nsp2106P106LcCacTa11B.1.5960.000087
ORF1ab/nsp2106P106LcCacTa11B.550.00295
ORF1ab/nsp2106P106LcCacTa11B.60.00091
ORF1ab/nsp2106P106LcCacTa11C.10.002392
ORF1ab/nsp2106P106LcCacTa11C.140.004329
ORF1ab/nsp2106P106LcCacTa11C.60.037037