CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp2 | 435 | N435N | N615N | syn | aaC | aaT | 178671 | 178671 | 1 | 2108-2110 |
Details of the mutation N435N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 178671 | 178671 | All | 0.034173 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 160200 | 160200 | B.1.1.7 | 0.143415 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3810 | 3810 | AY.4.2 | 0.082634 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2399 | 2399 | Q.8 | 0.395613 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2010 | 2010 | AY.4 | 0.003128 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1611 | 1611 | P.1 | 0.02538 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1198 | 1198 | AY.44 | 0.007292 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 919 | 919 | B.1.1 | 0.016672 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 864 | 864 | P.1.10 | 0.232821 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 663 | 663 | B.1 | 0.006073 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 431 | 431 | B.1.617.2 | 0.001623 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 388 | 388 | B.1.2 | 0.003416 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 331 | 331 | AY.6 | 0.013614 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 284 | 284 | B.1.526 | 0.006675 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 219 | 219 | Q.1 | 0.027665 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 188 | 188 | A.29 | 1 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 188 | 188 | AY.43 | 0.000833 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 181 | 181 | B.1.221 | 0.012857 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 121 | 121 | AY.25 | 0.000728 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 117 | 117 | AY.103 | 0.000726 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 113 | 113 | B.1.177 | 0.001488 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 100 | 100 | AY.102 | 0.002651 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 97 | 97 | B.1.1.317 | 0.039934 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 97 | 97 | B.1.177.73 | 0.054926 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 90 | 90 | AY.39 | 0.002224 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 67 | 67 | B.1.369 | 0.01911 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 58 | 58 | AY.3 | 0.000577 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 58 | 58 | B.1.177.12 | 0.008799 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 52 | 52 | B.1.429 | 0.001224 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 50 | 50 | P.1.12 | 0.024201 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 47 | 47 | AY.20 | 0.001827 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 46 | 46 | AY.26 | 0.001302 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 46 | 46 | B.1.1.347 | 0.836364 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 45 | 45 | B.1.177.21 | 0.003441 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 43 | 43 | B.1.160 | 0.001341 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 42 | 42 | AY.5 | 0.000867 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 35 | 35 | AY.79 | 0.042373 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 35 | 35 | B.1.1.348 | 0.027866 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 35 | 35 | B.1.351 | 0.00104 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 33 | 33 | C.37 | 0.00383 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 32 | 32 | B.1.258 | 0.00213 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 31 | 31 | AY.47 | 0.000964 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 29 | 29 | B.1.234 | 0.003826 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 29 | 29 | B.1.596 | 0.002527 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 28 | 28 | AY.29 | 0.000442 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 25 | 25 | AY.100 | 0.00115 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 25 | 25 | AY.39.1 | 0.00099 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 23 | 23 | AY.70 | 0.004796 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 22 | 22 | B.1.1.416 | 0.01991 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 22 | 22 | B.1.1.519 | 0.000874 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 22 | 22 | C.39 | 0.415094 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 21 | 21 | B.1.497 | 0.00661 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 19 | 19 | B.1.1.197 | 0.703704 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 19 | 19 | B.1.1.354 | 0.083333 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 19 | 19 | B.1.243 | 0.001322 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 19 | 19 | B.1.561 | 0.007543 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 19 | 19 | B.1.637 | 0.001388 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 18 | 18 | B.1.375 | 0.014754 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 18 | 18 | B.1.427 | 0.000909 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 17 | 17 | AY.120 | 0.000632 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 17 | 17 | B.1.1.507 | 0.147826 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 16 | 16 | AY.23 | 0.001116 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 16 | 16 | AY.4.5 | 0.00172 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 16 | 16 | B.1.177.7 | 0.002638 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 16 | 16 | B.1.36 | 0.002334 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 14 | 14 | B.1.576 | 0.012693 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 14 | 14 | P.1.15 | 0.003253 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 13 | 13 | B.1.595 | 0.003392 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 13 | 13 | P.1.1 | 0.00413 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 13 | 13 | Q.3 | 0.001885 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 12 | 12 | AY.99.2 | 0.001106 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 11 | 11 | AY.42 | 0.000443 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 11 | 11 | AY.75 | 0.000616 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 11 | 11 | P.1.13 | 0.009883 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 10 | 10 | AY.33 | 0.000668 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 10 | 10 | AY.98.1 | 0.000484 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 10 | 10 | B | 0.001278 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 10 | 10 | B.1.1.220 | 0.018587 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 10 | 10 | B.1.1.25 | 0.005685 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 9 | 9 | B.1.1.1 | 0.00294 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 9 | 9 | B.1.1.214 | 0.000499 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 9 | 9 | B.1.311 | 0.002471 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 9 | 9 | B.1.351.2 | 0.002723 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 8 | 8 | A.2.5 | 0.003992 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 8 | 8 | AY.95 | 0.006088 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 8 | 8 | B.1.1.121 | 0.019417 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 8 | 8 | B.1.36.18 | 0.003361 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | AY.117 | 0.000592 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | AY.62 | 0.00305 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | AY.9.2 | 0.000257 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | B.1.1.434 | 0.00244 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | B.1.177.60 | 0.001529 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | B.1.240 | 0.001509 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 7 | 7 | B.1.627 | 0.014141 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.114 | 0.001387 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.118 | 0.000376 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.119 | 0.000212 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.46.4 | 0.000987 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | AY.93 | 0.001638 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.1.486 | 0.009464 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.1.70 | 0.002046 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.232 | 0.003224 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.36.29 | 0.003104 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.404 | 0.007812 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | B.1.564 | 0.002555 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | P.1.14 | 0.000287 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 6 | 6 | R.1 | 0.00054 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | AY.69 | 0.000933 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | AY.75.1 | 0.000902 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.1.365 | 0.027933 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.177.15 | 0.003155 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.206 | 0.004078 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.351.3 | 0.004382 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.588 | 0.00455 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | B.1.621 | 0.000443 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 5 | 5 | D.2 | 0.000375 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | A.1 | 0.001127 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.46.2 | 0.002541 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.46.3 | 0.003735 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.46.6 | 0.000289 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.64 | 0.002381 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.74 | 0.000463 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | AY.88 | 0.003537 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.1.192 | 0.009238 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.1.218 | 0.030769 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.1.39 | 0.002039 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.1.528 | 0.019231 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.110.3 | 0.002874 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.214.3 | 0.028571 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.258.17 | 0.000416 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.320 | 0.004981 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.36.38 | 0.006568 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.471 | 0.010929 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.609 | 0.001918 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | C.36.3 | 0.002269 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | N.4 | 0.017021 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 4 | 4 | P.1.17 | 0.000647 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | A | 0.001161 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | A.27 | 0.004967 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.1 | 0.001187 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.113 | 0.000427 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.34.1 | 0.00153 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.36 | 0.000445 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.59 | 0.001589 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.67 | 0.001393 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.84 | 0.001312 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | AY.92 | 0.000862 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.141 | 0.006036 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.269 | 0.00406 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.277 | 0.002276 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.28 | 0.000934 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.312 | 0.005736 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.318 | 0.000905 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.409 | 0.008499 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.1.523 | 0.004687 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.139 | 0.002199 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.177.82 | 0.001432 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.221.2 | 0.012048 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.349 | 0.002144 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.438.1 | 0.000322 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.466.2 | 0.001174 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.516 | 0.005871 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.575.1 | 0.007317 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | B.1.630 | 0.015707 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | C.11 | 0.031915 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | P.1.2 | 0.003468 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | A.2 | 0.001324 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.106 | 0.00067 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.116 | 0.000574 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.16 | 0.000759 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.30 | 0.000791 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.4.2.1 | 0.000298 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.68 | 0.000547 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.7.1 | 0.000225 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | AY.99 | 0.002099 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.153 | 0.002191 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.176 | 0.000879 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.263 | 0.003115 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.294 | 0.002532 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.1.396 | 0.090909 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.241 | 0.001623 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.336 | 0.004878 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.36.17 | 0.000988 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.36.26 | 0.005714 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.36.7 | 0.008 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.396 | 0.001411 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.425 | 0.005988 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.459 | 0.008163 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.530 | 0.014286 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.564.1 | 0.003155 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.580 | 0.00813 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.617.3 | 0.00597 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.619 | 0.001742 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | B.6 | 0.00182 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | C.32 | 0.046512 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 2 | 2 | P.1.16 | 0.000748 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | 0.055556 | |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AV.1 | 0.005051 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.10 | 0.00053 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.104 | 0.001984 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.107 | 0.000466 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.109 | 0.00074 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.116.1 | 0.000311 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.32 | 0.000532 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.51 | 0.000909 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.53 | 0.000288 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.7.2 | 0.000559 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.76 | 0.004831 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.9 | 0.000068 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | AY.90 | 0.000684 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.162 | 0.029412 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.170 | 0.001247 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.253 | 0.002506 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.26 | 0.005236 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.286 | 0.002899 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.289 | 0.002083 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.302 | 0.002075 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.307 | 0.002532 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.332 | 0.03125 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.370 | 0.012658 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.374 | 0.002375 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.406 | 0.006494 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.440 | 0.011765 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.1.464 | 0.001473 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.111 | 0.001175 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.26 | 0.006993 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.36 | 0.016129 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.65 | 0.000665 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.80 | 0.001912 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.189 | 0.004292 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.190 | 0.01 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.199 | 0.004132 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.214.2 | 0.0006 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.258.24 | 0.010753 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.329 | 0.000608 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.330 | 0.028571 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.36.8 | 0.001 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.397 | 0.004854 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.400 | 0.000429 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.408 | 0.00369 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.411 | 0.003704 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.420 | 0.010417 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.432 | 0.011236 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.480 | 0.002488 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.503 | 0.002488 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.527 | 0.003704 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.538 | 0.008065 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.560 | 0.00463 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.567 | 0.003333 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.574 | 0.002151 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.575 | 0.000303 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.577 | 0.000687 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.619.1 | 0.000641 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.620 | 0.000946 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.625 | 0.002353 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.634 | 0.003425 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.635 | 0.017544 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.636 | 0.006711 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.1.84 | 0.020833 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.4 | 0.002208 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | B.55 | 0.00295 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.14 | 0.004329 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.16 | 0.00106 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.36 | 0.000911 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.36.1 | 0.004149 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | C.4 | 0.01 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | N.9 | 0.005952 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | P.1.10.1 | 0.00813 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp2 | 435 | N435N | aaC | aaT | 1 | 1 | Q.5 | 0.016949 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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