CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L97L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp297L97LL277LsynTtaCta5463900.7142861094-1096
ORF1ab/nsp297L97LL277LsynttAttG5461530.280221094-1096
ORF1ab/nsp297L97LL277LsynTtACtG54610.00183151094-1096
ORF1ab/nsp297L97LL277LsynTtACtC54610.00183151094-1096
ORF1ab/nsp297L97LL277LsynTtACtT54610.00183151094-1096

Details of the mutation L97L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp297L97LTtaCta390546All0.000075
ORF1ab/nsp297L97LttAttG153546All0.000029
ORF1ab/nsp297L97LTtACtT1546All0
ORF1ab/nsp297L97LTtACtC1546All0
ORF1ab/nsp297L97LTtACtG1546All0
ORF1ab/nsp297L97LTtaCta70104AY.40.000109
ORF1ab/nsp297L97LttAttG34104AY.40.000053
ORF1ab/nsp297L97LTtaCta5264B.1.1.70.000047
ORF1ab/nsp297L97LttAttG1264B.1.1.70.000011
ORF1ab/nsp297L97LTtaCta4141B.1.1.2011
ORF1ab/nsp297L97LttAttG2637B.10.000238
ORF1ab/nsp297L97LTtaCta1137B.10.000101
ORF1ab/nsp297L97LttAttG3232B.1.2451
ORF1ab/nsp297L97LTtaCta2829B.1.617.20.000105
ORF1ab/nsp297L97LttAttG129B.1.617.20.000004
ORF1ab/nsp297L97LTtaCta2525AY.230.001744
ORF1ab/nsp297L97LTtaCta2122AY.250.000126
ORF1ab/nsp297L97LttAttG122AY.250.000006
ORF1ab/nsp297L97LTtaCta2121B.1.1770.000277
ORF1ab/nsp297L97LTtaCta1919AY.1080.020948
ORF1ab/nsp297L97LttAttG1717B.1.5650.013776
ORF1ab/nsp297L97LTtaCta1212AY.30.000119
ORF1ab/nsp297L97LTtaCta712AY.430.000031
ORF1ab/nsp297L97LttAttG512AY.430.000022
ORF1ab/nsp297L97LTtaCta88AY.470.000249
ORF1ab/nsp297L97LTtaCta57B.1.10.000091
ORF1ab/nsp297L97LttAttG27B.1.10.000036
ORF1ab/nsp297L97LTtaCta67B.1.20.000053
ORF1ab/nsp297L97LttAttG17B.1.20.000009
ORF1ab/nsp297L97LTtaCta66B.1.1.5190.000238
ORF1ab/nsp297L97LTtaCta35AY.440.000018
ORF1ab/nsp297L97LttAttG25AY.440.000012
ORF1ab/nsp297L97LTtaCta55AY.980.000395
ORF1ab/nsp297L97LTtaCta44AY.60.000165
ORF1ab/nsp297L97LTtaCta44P.10.000063
ORF1ab/nsp297L97LttAttG33AY.350.000699
ORF1ab/nsp297L97LttAttG33AY.420.000121
ORF1ab/nsp297L97LTtaCta23B.1.1.1370.025
ORF1ab/nsp297L97LTtACtG13B.1.1.1370.0125
ORF1ab/nsp297L97LttAttG23B.1.6370.000146
ORF1ab/nsp297L97LTtaCta13B.1.6370.000073
ORF1ab/nsp297L97LTtaCta33B.4.80.214286
ORF1ab/nsp297L97LTtaCta120.055556
ORF1ab/nsp297L97LTtACtT120.055556
ORF1ab/nsp297L97LTtaCta12A.60.005128
ORF1ab/nsp297L97LTtACtC12A.60.005128
ORF1ab/nsp297L97LttAttG12AY.1030.000006
ORF1ab/nsp297L97LTtaCta12AY.1030.000006
ORF1ab/nsp297L97LTtaCta22AY.260.000057
ORF1ab/nsp297L97LTtaCta22B.1.1.1920.004619
ORF1ab/nsp297L97LTtaCta22B.1.1.2140.000111
ORF1ab/nsp297L97LTtaCta22B.1.160.270.030303
ORF1ab/nsp297L97LTtaCta22B.1.36.180.00084
ORF1ab/nsp297L97LTtaCta22B.1.3670.001585
ORF1ab/nsp297L97LTtaCta22B.1.4290.000047
ORF1ab/nsp297L97LTtaCta22B.1.6090.000959
ORF1ab/nsp297L97LTtaCta11A.2.20.001689
ORF1ab/nsp297L97LTtaCta11AE.80.000489
ORF1ab/nsp297L97LTtaCta11AY.1020.000027
ORF1ab/nsp297L97LTtaCta11AY.1140.000231
ORF1ab/nsp297L97LttAttG11AY.160.00038
ORF1ab/nsp297L97LTtaCta11AY.200.000039
ORF1ab/nsp297L97LTtaCta11AY.240.000431
ORF1ab/nsp297L97LttAttG11AY.290.000016
ORF1ab/nsp297L97LTtaCta11AY.3.10.000085
ORF1ab/nsp297L97LTtaCta11AY.390.000025
ORF1ab/nsp297L97LTtaCta11AY.46.20.000635
ORF1ab/nsp297L97LTtaCta11AY.50.000021
ORF1ab/nsp297L97LTtaCta11AY.560.001605
ORF1ab/nsp297L97LttAttG11AY.640.000595
ORF1ab/nsp297L97LTtaCta11AY.7.10.000113
ORF1ab/nsp297L97LTtaCta11AY.740.000116
ORF1ab/nsp297L97LTtaCta11AY.750.000056
ORF1ab/nsp297L97LTtaCta11AY.790.001211
ORF1ab/nsp297L97LTtaCta11B.1.1.2220.000204
ORF1ab/nsp297L97LttAttG11B.1.3330.010526
ORF1ab/nsp297L97LttAttG11B.1.5260.000024
ORF1ab/nsp297L97LttAttG11B.1.5820.000491
ORF1ab/nsp297L97LttAttG11B.1.5960.000087
ORF1ab/nsp297L97LttAttG11B.1.621.10.000506
ORF1ab/nsp297L97LttAttG11P.1.140.000048
ORF1ab/nsp297L97LttAttG11P.1.60.001946
ORF1ab/nsp297L97LTtaCta11Q.10.000126
ORF1ab/nsp297L97LttAttG11R.10.00009