CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L635del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2635L635del1L815del1delCtc-tc940.4444442708-2710
ORF1ab/nsp2635L635del1L815del1delctCct-930.3333332708-2710
ORF1ab/nsp2635L635del1L815del1delcTcc-c910.1111112708-2710
ORF1ab/nsp2635L635del1L815del1delcTCcC-910.1111112708-2710

Details of the mutation L635del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2635L635del1Ctc-tc49All0.000001
ORF1ab/nsp2635L635del1ctCct-39All0.000001
ORF1ab/nsp2635L635del1cTCcC-19All0
ORF1ab/nsp2635L635del1cTcc-c19All0
ORF1ab/nsp2635L635del1Ctc-tc13AY.440.000006
ORF1ab/nsp2635L635del1ctCct-13AY.440.000006
ORF1ab/nsp2635L635del1cTcc-c13AY.440.000006
ORF1ab/nsp2635L635del1Ctc-tc220.111111
ORF1ab/nsp2635L635del1ctCct-12B.1.20.000009
ORF1ab/nsp2635L635del1cTCcC-12B.1.20.000009
ORF1ab/nsp2635L635del1Ctc-tc11AY.980.000079
ORF1ab/nsp2635L635del1ctCct-11B.1.617.20.000004