CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L567del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2567L567del1L747del1delcTtc-t950.5555562504-2506
ORF1ab/nsp2567L567del1L747del1delCtTAt-920.2222222504-2506
ORF1ab/nsp2567L567del1L747del1delCTT-GG910.1111112504-2506
ORF1ab/nsp2567L567del1L747del1delctTct-910.1111112504-2506

Details of the mutation L567del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2567L567del1cTtc-t59All0.000001
ORF1ab/nsp2567L567del1CtTAt-29All0
ORF1ab/nsp2567L567del1CTT-GG19All0
ORF1ab/nsp2567L567del1ctTct-19All0
ORF1ab/nsp2567L567del1CtTAt-220.111111
ORF1ab/nsp2567L567del1CTT-GG12B.1.2430.00007
ORF1ab/nsp2567L567del1cTtc-t12B.1.2430.00007
ORF1ab/nsp2567L567del1ctTct-11AY.440.000006
ORF1ab/nsp2567L567del1cTtc-t11B.10.000009
ORF1ab/nsp2567L567del1cTtc-t11B.1.10.000018
ORF1ab/nsp2567L567del1cTtc-t11B.1.1.2360.006897
ORF1ab/nsp2567L567del1cTtc-t11B.1.1.5190.00004