CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L39R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp239L39RL219RnonsyncTgcGg13131920-922

Details of the mutation L39R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp239L39RcTgcGg1313All0.000002
ORF1ab/nsp239L39RcTgcGg33AY.40.000005
ORF1ab/nsp239L39RcTgcGg22AY.260.000057
ORF1ab/nsp239L39RcTgcGg11AY.1030.000006
ORF1ab/nsp239L39RcTgcGg11AY.430.000004
ORF1ab/nsp239L39RcTgcGg11AY.630.000387
ORF1ab/nsp239L39RcTgcGg11B.1.1.70.000001
ORF1ab/nsp239L39RcTgcGg11B.1.1770.000013
ORF1ab/nsp239L39RcTgcGg11B.1.2580.000067
ORF1ab/nsp239L39RcTgcGg11B.1.617.20.000004
ORF1ab/nsp239L39RcTgcGg11D.20.000075