CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L274F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2274L274FL454FnonsynCtcTtc378037760.9989421625-1627
ORF1ab/nsp2274L274FL454FnonsynCtCTtT378040.00105821625-1627

Details of the mutation L274F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2274L274FCtcTtc37763780All0.000722
ORF1ab/nsp2274L274FCtCTtT43780All0.000001
ORF1ab/nsp2274L274FCtcTtc14801481B.1.1.70.001325
ORF1ab/nsp2274L274FCtCTtT11481B.1.1.70.000001
ORF1ab/nsp2274L274FCtcTtc639639B.1.4160.810914
ORF1ab/nsp2274L274FCtcTtc288288AY.39.10.011409
ORF1ab/nsp2274L274FCtcTtc209209AY.40.000325
ORF1ab/nsp2274L274FCtcTtc133133AY.30.001323
ORF1ab/nsp2274L274FCtcTtc106106AY.1030.000658
ORF1ab/nsp2274L274FCtcTtc7575B.1.1.5190.002978
ORF1ab/nsp2274L274FCtcTtc5457B.10.000495
ORF1ab/nsp2274L274FCtCTtT357B.10.000027
ORF1ab/nsp2274L274FCtcTtc4848B.1.617.20.000181
ORF1ab/nsp2274L274FCtcTtc4444B.1.1770.000579
ORF1ab/nsp2274L274FCtcTtc4242AY.420.00169
ORF1ab/nsp2274L274FCtcTtc3939P.10.000614
ORF1ab/nsp2274L274FCtcTtc3131AY.440.000189
ORF1ab/nsp2274L274FCtcTtc3030AY.430.000133
ORF1ab/nsp2274L274FCtcTtc2323B.1.20.000203
ORF1ab/nsp2274L274FCtcTtc2222AY.1020.000583
ORF1ab/nsp2274L274FCtcTtc2222AY.250.000132
ORF1ab/nsp2274L274FCtcTtc2222B.1.595.10.128655
ORF1ab/nsp2274L274FCtcTtc1919AY.4.20.000412
ORF1ab/nsp2274L274FCtcTtc1919B.1.1600.000593
ORF1ab/nsp2274L274FCtcTtc1717AY.220.035565
ORF1ab/nsp2274L274FCtcTtc1616AY.290.000252
ORF1ab/nsp2274L274FCtcTtc1616B.1.10.00029
ORF1ab/nsp2274L274FCtcTtc1515B.1.4090.011719
ORF1ab/nsp2274L274FCtcTtc1111AY.99.20.001014
ORF1ab/nsp2274L274FCtcTtc1111B.1.4290.000259
ORF1ab/nsp2274L274FCtcTtc1111B.1.466.20.004304
ORF1ab/nsp2274L274FCtcTtc1111Q.10.00139
ORF1ab/nsp2274L274FCtcTtc1010AD.20.00219
ORF1ab/nsp2274L274FCtcTtc1010AY.260.000283
ORF1ab/nsp2274L274FCtcTtc1010B.1.5250.001132
ORF1ab/nsp2274L274FCtcTtc1010P.1.140.000478
ORF1ab/nsp2274L274FCtcTtc99AY.1000.000414
ORF1ab/nsp2274L274FCtcTtc99AY.390.000222
ORF1ab/nsp2274L274FCtcTtc99B0.00115
ORF1ab/nsp2274L274FCtcTtc88AY.470.000249
ORF1ab/nsp2274L274FCtcTtc88B.1.3510.000238
ORF1ab/nsp2274L274FCtcTtc66AY.1200.000223
ORF1ab/nsp2274L274FCtcTtc66B.1.1.280.001867
ORF1ab/nsp2274L274FCtcTtc66B.1.1.3110.002149
ORF1ab/nsp2274L274FCtcTtc66B.1.1.4340.002091
ORF1ab/nsp2274L274FCtcTtc66B.1.177.750.006243
ORF1ab/nsp2274L274FCtcTtc66B.1.4270.000303
ORF1ab/nsp2274L274FCtcTtc66B.1.5240.008439
ORF1ab/nsp2274L274FCtcTtc66B.1.5260.000141
ORF1ab/nsp2274L274FCtcTtc66R.10.00054
ORF1ab/nsp2274L274FCtcTtc55AY.750.00028
ORF1ab/nsp2274L274FCtcTtc55B.1.1.2140.000277
ORF1ab/nsp2274L274FCtcTtc55B.1.1.4580.208333
ORF1ab/nsp2274L274FCtcTtc55B.1.177.70.000824
ORF1ab/nsp2274L274FCtcTtc44AY.330.000267
ORF1ab/nsp2274L274FCtcTtc44B.1.1.480.011494
ORF1ab/nsp2274L274FCtcTtc44B.1.1.700.001364
ORF1ab/nsp2274L274FCtcTtc44B.1.177.860.000734
ORF1ab/nsp2274L274FCtcTtc44B.1.2210.000284
ORF1ab/nsp2274L274FCtcTtc44B.1.3960.002823
ORF1ab/nsp2274L274FCtcTtc44P.1.150.000929
ORF1ab/nsp2274L274FCtcTtc44P.1.70.001277
ORF1ab/nsp2274L274FCtcTtc44Q.30.00058
ORF1ab/nsp2274L274FCtcTtc33AY.3.10.000256
ORF1ab/nsp2274L274FCtcTtc33AY.60.000123
ORF1ab/nsp2274L274FCtcTtc33AY.9.20.00011
ORF1ab/nsp2274L274FCtcTtc33B.1.1.5260.010638
ORF1ab/nsp2274L274FCtcTtc33B.1.177.600.000655
ORF1ab/nsp2274L274FCtcTtc33B.1.2430.000209
ORF1ab/nsp2274L274FCtcTtc33B.1.360.000438
ORF1ab/nsp2274L274FCtcTtc33B.1.4590.012245
ORF1ab/nsp2274L274FCtcTtc33B.1.5610.001191
ORF1ab/nsp2274L274FCtcTtc33B.1.617.10.000387
ORF1ab/nsp2274L274FCtcTtc33D.20.000225
ORF1ab/nsp2274L274FCtcTtc22A.2.50.000998
ORF1ab/nsp2274L274FCtcTtc22AY.116.10.000623
ORF1ab/nsp2274L274FCtcTtc22AY.200.000078
ORF1ab/nsp2274L274FCtcTtc22AY.230.000139
ORF1ab/nsp2274L274FCtcTtc22AY.610.00021
ORF1ab/nsp2274L274FCtcTtc22B.1.1.2980.001724
ORF1ab/nsp2274L274FCtcTtc22B.1.1.3480.001592
ORF1ab/nsp2274L274FCtcTtc22B.1.1.500.001358
ORF1ab/nsp2274L274FCtcTtc22B.1.177.100.001756
ORF1ab/nsp2274L274FCtcTtc22B.1.258.170.000208
ORF1ab/nsp2274L274FCtcTtc22B.1.4700.002809
ORF1ab/nsp2274L274FCtcTtc22B.1.5670.006667
ORF1ab/nsp2274L274FCtcTtc22B.1.5820.000981
ORF1ab/nsp2274L274FCtcTtc22B.1.6370.000146
ORF1ab/nsp2274L274FCtcTtc22P.1.120.000968
ORF1ab/nsp2274L274FCtcTtc11A.90.045455
ORF1ab/nsp2274L274FCtcTtc11AU.30.00211
ORF1ab/nsp2274L274FCtcTtc11AY.1060.000335
ORF1ab/nsp2274L274FCtcTtc11AY.1100.000113
ORF1ab/nsp2274L274FCtcTtc11AY.1210.000135
ORF1ab/nsp2274L274FCtcTtc11AY.340.000097
ORF1ab/nsp2274L274FCtcTtc11AY.370.000316
ORF1ab/nsp2274L274FCtcTtc11AY.4.50.000107
ORF1ab/nsp2274L274FCtcTtc11AY.410.000294
ORF1ab/nsp2274L274FCtcTtc11AY.46.20.000635
ORF1ab/nsp2274L274FCtcTtc11AY.46.40.000165
ORF1ab/nsp2274L274FCtcTtc11AY.46.50.000198
ORF1ab/nsp2274L274FCtcTtc11AY.46.60.000072
ORF1ab/nsp2274L274FCtcTtc11AY.590.00053
ORF1ab/nsp2274L274FCtcTtc11AY.70.000196
ORF1ab/nsp2274L274FCtcTtc11AY.7.20.000559
ORF1ab/nsp2274L274FCtcTtc11AY.700.000209
ORF1ab/nsp2274L274FCtcTtc11AY.730.000665
ORF1ab/nsp2274L274FCtcTtc11AY.860.00083
ORF1ab/nsp2274L274FCtcTtc11AY.900.000684
ORF1ab/nsp2274L274FCtcTtc11AY.920.000287
ORF1ab/nsp2274L274FCtcTtc11AY.940.000443
ORF1ab/nsp2274L274FCtcTtc11B.1.1.100.001115
ORF1ab/nsp2274L274FCtcTtc11B.1.1.1530.001095
ORF1ab/nsp2274L274FCtcTtc11B.1.1.250.000569
ORF1ab/nsp2274L274FCtcTtc11B.1.1.2770.000759
ORF1ab/nsp2274L274FCtcTtc11B.1.1.3720.000689
ORF1ab/nsp2274L274FCtcTtc11B.1.1.3740.002375
ORF1ab/nsp2274L274FCtcTtc11B.1.1.3980.003226
ORF1ab/nsp2274L274FCtcTtc11B.1.1.4250.045455
ORF1ab/nsp2274L274FCtcTtc11B.1.1.530.013699
ORF1ab/nsp2274L274FCtcTtc11B.1.1.750.010638
ORF1ab/nsp2274L274FCtcTtc11B.1.177.330.001645
ORF1ab/nsp2274L274FCtcTtc11B.1.177.40.000211
ORF1ab/nsp2274L274FCtcTtc11B.1.177.570.000281
ORF1ab/nsp2274L274FCtcTtc11B.1.177.620.001192
ORF1ab/nsp2274L274FCtcTtc11B.1.177.720.00339
ORF1ab/nsp2274L274FCtcTtc11B.1.2030.0625
ORF1ab/nsp2274L274FCtcTtc11B.1.220.001318
ORF1ab/nsp2274L274FCtcTtc11B.1.2400.000216
ORF1ab/nsp2274L274FCtcTtc11B.1.2580.000067
ORF1ab/nsp2274L274FCtcTtc11B.1.2650.001271
ORF1ab/nsp2274L274FCtcTtc11B.1.36.10.00114
ORF1ab/nsp2274L274FCtcTtc11B.1.36.90.003215
ORF1ab/nsp2274L274FCtcTtc11B.1.416.10.001563
ORF1ab/nsp2274L274FCtcTtc11B.1.4260.001009
ORF1ab/nsp2274L274FCtcTtc11B.1.438.10.000107
ORF1ab/nsp2274L274FCtcTtc11B.1.4690.00361
ORF1ab/nsp2274L274FCtcTtc11B.1.4710.002732
ORF1ab/nsp2274L274FCtcTtc11B.1.4970.000315
ORF1ab/nsp2274L274FCtcTtc11B.1.5410.004425
ORF1ab/nsp2274L274FCtcTtc11B.1.5750.000303
ORF1ab/nsp2274L274FCtcTtc11B.1.575.10.002439
ORF1ab/nsp2274L274FCtcTtc11B.1.5760.000907
ORF1ab/nsp2274L274FCtcTtc11B.1.5950.000261
ORF1ab/nsp2274L274FCtcTtc11B.1.5960.000087
ORF1ab/nsp2274L274FCtcTtc11B.1.596.10.009346
ORF1ab/nsp2274L274FCtcTtc11B.1.6210.000089
ORF1ab/nsp2274L274FCtcTtc11B.1.621.10.000506
ORF1ab/nsp2274L274FCtcTtc11B.4.50.011905
ORF1ab/nsp2274L274FCtcTtc11B.550.00295
ORF1ab/nsp2274L274FCtcTtc11C.350.000774
ORF1ab/nsp2274L274FCtcTtc11C.370.000116
ORF1ab/nsp2274L274FCtcTtc11D.50.004975
ORF1ab/nsp2274L274FCtcTtc11P.1.20.001156
ORF1ab/nsp2274L274FCtcTtc11P.20.000187
ORF1ab/nsp2274L274FCtcTtc11Q.40.000455