CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp2 : Mut = L217L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp2217L217LL397LsynctTctC7476530.8741631454-1456
ORF1ab/nsp2217L217LL397LsynctTctG747850.1137881454-1456
ORF1ab/nsp2217L217LL397LsynctTctA74790.01204821454-1456

Details of the mutation L217L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp2217L217LctTctC653747All0.000125
ORF1ab/nsp2217L217LctTctG85747All0.000016
ORF1ab/nsp2217L217LctTctA9747All0.000002
ORF1ab/nsp2217L217LctTctC415415B.1.1.3740.985748
ORF1ab/nsp2217L217LctTctC8989AY.440.000542
ORF1ab/nsp2217L217LctTctC3041B.1.1.70.000027
ORF1ab/nsp2217L217LctTctG941B.1.1.70.000008
ORF1ab/nsp2217L217LctTctA241B.1.1.70.000002
ORF1ab/nsp2217L217LctTctG3539AY.40.000054
ORF1ab/nsp2217L217LctTctC239AY.40.000003
ORF1ab/nsp2217L217LctTctA239AY.40.000003
ORF1ab/nsp2217L217LctTctC1115B.10.000101
ORF1ab/nsp2217L217LctTctG315B.10.000027
ORF1ab/nsp2217L217LctTctA115B.10.000009
ORF1ab/nsp2217L217LctTctG1213B.1.4290.000282
ORF1ab/nsp2217L217LctTctC113B.1.4290.000024
ORF1ab/nsp2217L217LctTctC911B.1.10.000163
ORF1ab/nsp2217L217LctTctG211B.1.10.000036
ORF1ab/nsp2217L217LctTctC99B.1.1.120.067164
ORF1ab/nsp2217L217LctTctC77B.1.1770.000092
ORF1ab/nsp2217L217LctTctC66AY.590.003178
ORF1ab/nsp2217L217LctTctG66B.1.36.290.003104
ORF1ab/nsp2217L217LctTctC36B.1.617.20.000011
ORF1ab/nsp2217L217LctTctG36B.1.617.20.000011
ORF1ab/nsp2217L217LctTctG55AY.460.00052
ORF1ab/nsp2217L217LctTctC55B.1.1.1920.011547
ORF1ab/nsp2217L217LctTctC55B.1.1.3180.001509
ORF1ab/nsp2217L217LctTctC45P.10.000063
ORF1ab/nsp2217L217LctTctG15P.10.000016
ORF1ab/nsp2217L217LctTctC44B.1.1.4620.034483
ORF1ab/nsp2217L217LctTctC34B.1.20.000026
ORF1ab/nsp2217L217LctTctA14B.1.20.000009
ORF1ab/nsp2217L217LctTctC44B.1.3490.002859
ORF1ab/nsp2217L217LctTctC33B.1.1.1340.034091
ORF1ab/nsp2217L217LctTctC33B.1.1.1610.010601
ORF1ab/nsp2217L217LctTctC33B.1.36.220.003623
ORF1ab/nsp2217L217LctTctC12AY.1030.000006
ORF1ab/nsp2217L217LctTctG12AY.1030.000006
ORF1ab/nsp2217L217LctTctG22AY.320.001065
ORF1ab/nsp2217L217LctTctG12AY.9.20.000037
ORF1ab/nsp2217L217LctTctC12AY.9.20.000037
ORF1ab/nsp2217L217LctTctC22B.1.1.2140.000111
ORF1ab/nsp2217L217LctTctC22B.1.1.3060.000877
ORF1ab/nsp2217L217LctTctC22B.1.1.5260.007092
ORF1ab/nsp2217L217LctTctC22B.1.3110.000549
ORF1ab/nsp2217L217LctTctC22B.1.4270.000101
ORF1ab/nsp2217L217LctTctC11A.20.000662
ORF1ab/nsp2217L217LctTctA11A.60.005128
ORF1ab/nsp2217L217LctTctC11AD.20.000219
ORF1ab/nsp2217L217LctTctC11AY.1000.000046
ORF1ab/nsp2217L217LctTctG11AY.1100.000113
ORF1ab/nsp2217L217LctTctC11AY.1170.000085
ORF1ab/nsp2217L217LctTctG11AY.340.000097
ORF1ab/nsp2217L217LctTctC11AY.390.000025
ORF1ab/nsp2217L217LctTctA11AY.4.20.000022
ORF1ab/nsp2217L217LctTctC11AY.430.000004
ORF1ab/nsp2217L217LctTctA11AY.60.000041
ORF1ab/nsp2217L217LctTctG11AY.840.000437
ORF1ab/nsp2217L217LctTctG11AY.9.10.000084
ORF1ab/nsp2217L217LctTctC11B0.000128
ORF1ab/nsp2217L217LctTctC11B.1.1.2000.007463
ORF1ab/nsp2217L217LctTctC11B.1.1.330.000421
ORF1ab/nsp2217L217LctTctC11B.1.1.3630.005988
ORF1ab/nsp2217L217LctTctC11B.1.1.370.000193
ORF1ab/nsp2217L217LctTctC11B.1.1.3980.003226
ORF1ab/nsp2217L217LctTctC11B.1.1.4090.002833
ORF1ab/nsp2217L217LctTctC11B.1.1.4340.000349
ORF1ab/nsp2217L217LctTctC11B.1.1.4370.010417
ORF1ab/nsp2217L217LctTctC11B.1.1.560.017857
ORF1ab/nsp2217L217LctTctC11B.1.177.50.001242
ORF1ab/nsp2217L217LctTctC11B.1.177.730.000566
ORF1ab/nsp2217L217LctTctC11B.1.2600.003344
ORF1ab/nsp2217L217LctTctC11B.1.5260.000024
ORF1ab/nsp2217L217LctTctC11B.1.5610.000397
ORF1ab/nsp2217L217LctTctC11B.1.6210.000089
ORF1ab/nsp2217L217LctTctC11C.350.000774
ORF1ab/nsp2217L217LctTctC11C.370.000116
ORF1ab/nsp2217L217LctTctG11D.20.000075
ORF1ab/nsp2217L217LctTctC11P.1.170.000162